Re: [R-SIG-Mac] PCRE JIT compilation error
No problem at all with 10.13.6. G, Den 2020-04-01 kl. 15:20, skrev Bryan Hanson: Having played with things a bit more, this message appears all over the place as people are beginning to report. Another simple way to trigger it is to do: ?dist Bryan On Apr 1, 2020, at 8:36 AM, Matthias Krawutschke wrote: Hello together, i´ve got this message too, but my systems show me first the list of all installed libraries on my MAC. Best regards and take care…. Matthias Krawutschke, Dipl. Inf. Universität Potsdam ZIM - Zentrum für Informationstechnologie und Medienmanagement Team Infrastruktur Server und Storage Spezialized: High-Performance-Computing and Kubernetes Campus Am Neuen Palais: Am Neuen Palais 10 | 14469 Potsdam Tel: +49 331 977-153065, Fax: +49 331 977-1750 Internet: https://www.uni-potsdam.de/de/zim/angebote-loesungen/hpc.html -Ursprüngliche Nachricht- Von: R-SIG-Mac Im Auftrag von Bryan Hanson Gesendet: Mittwoch, 1. April 2020 13:30 An: r-sig-mac R Betreff: [R-SIG-Mac] PCRE JIT compilation error On a fresh install of the binary from mac.r-project.org, if I simply do: library() I see: R > library() There were 30 warnings (use warnings() to see them) R > warnings() Warning messages: 1: In strsplit(x, "\n[ \t\n]*\n", perl = TRUE) : PCRE JIT compilation error 'no more memory' 2: In FUN(X[[i]], ...) : PCRE JIT compilation error 'no more memory' etc. The usual window with installed packages does open. Starting the conversation here on the Mac list, though it may be a bigger problem. Thanks, Bryan Prof. Bryan Hanson (emeritus) Dept of Chemistry & Biochemistry DePauw University Greencastle IN 46135 USA Web: academic.depauw.edu/~hanson/index.html Repo: github.com/bryanhanson Nerdy Blog: ChemoSpec.org The Twit: @ProfBryanHanson I’m usually @ -4 GMT/UTC R > sessionInfo() R version 4.0.0 alpha (2020-03-29 r78109) Platform: x86_64-apple-darwin17.0 (64-bit) Running under: macOS Mojave 10.14.6 Matrix products: default BLAS: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRblas.dylib LAPACK: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRlapack.dylib locale: [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 attached base packages: [1] stats graphics grDevices utils datasets methods [7] base loaded via a namespace (and not attached): [1] compiler_4.0.0 [[alternative HTML version deleted]] ___ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac ___ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac ___ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac
Re: [R-SIG-Mac] PCRE JIT compilation error
Confirmed (r78130). Thank you as always Simon. Bryan > On Apr 1, 2020, at 4:46 PM, Simon Urbanek wrote: > > Bryan, > > thanks! There seems to be an issue with PCRE2 JIT on Mojave. I have now > disabled JIT in PCRE2 which seems to be the recommended fix > > I have built the latest version of R 4.0.0 alpha - it is now available from > > http://mac.r-project.org/high-sierra/R-4.0-branch/R-4.0-branch.pkg > > as usual. > > Thanks, > Simon > > >> On 2/04/2020, at 12:30 AM, Bryan Hanson wrote: >> >> On a fresh install of the binary from mac.r-project.org, if I simply do: >> >> library() >> >> I see: >> >> R > library() >> There were 30 warnings (use warnings() to see them) >> R > warnings() >> Warning messages: >> 1: In strsplit(x, "\n[ \t\n]*\n", perl = TRUE) : PCRE JIT compilation error >> 'no more memory' >> 2: In FUN(X[[i]], ...) : PCRE JIT compilation error >> 'no more memory' >> >> etc. The usual window with installed packages does open. >> >> Starting the conversation here on the Mac list, though it may be a bigger >> problem. >> >> Thanks, Bryan >> >> Prof. Bryan Hanson (emeritus) >> Dept of Chemistry & Biochemistry >> DePauw University >> Greencastle IN 46135 USA >> Web: academic.depauw.edu/~hanson/index.html >> Repo: github.com/bryanhanson >> Nerdy Blog: ChemoSpec.org >> The Twit: @ProfBryanHanson >> I’m usually @ -4 GMT/UTC >> >> R > sessionInfo() >> R version 4.0.0 alpha (2020-03-29 r78109) >> Platform: x86_64-apple-darwin17.0 (64-bit) >> Running under: macOS Mojave 10.14.6 >> >> Matrix products: default >> BLAS: >> /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRblas.dylib >> LAPACK: >> /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRlapack.dylib >> >> locale: >> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 >> >> attached base packages: >> [1] stats graphics grDevices utils datasets methods >> [7] base >> >> loaded via a namespace (and not attached): >> [1] compiler_4.0.0 >> >> >> >> >> >> >> >> >> >> >> >> >> [[alternative HTML version deleted]] >> >> ___ >> R-SIG-Mac mailing list >> R-SIG-Mac@r-project.org >> https://stat.ethz.ch/mailman/listinfo/r-sig-mac >> > ___ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac
Re: [R-SIG-Mac] PCRE JIT compilation error
Bryan, thanks! There seems to be an issue with PCRE2 JIT on Mojave. I have now disabled JIT in PCRE2 which seems to be the recommended fix I have built the latest version of R 4.0.0 alpha - it is now available from http://mac.r-project.org/high-sierra/R-4.0-branch/R-4.0-branch.pkg as usual. Thanks, Simon > On 2/04/2020, at 12:30 AM, Bryan Hanson wrote: > > On a fresh install of the binary from mac.r-project.org, if I simply do: > > library() > > I see: > > R > library() > There were 30 warnings (use warnings() to see them) > R > warnings() > Warning messages: > 1: In strsplit(x, "\n[ \t\n]*\n", perl = TRUE) : PCRE JIT compilation error > 'no more memory' > 2: In FUN(X[[i]], ...) : PCRE JIT compilation error > 'no more memory' > > etc. The usual window with installed packages does open. > > Starting the conversation here on the Mac list, though it may be a bigger > problem. > > Thanks, Bryan > > Prof. Bryan Hanson (emeritus) > Dept of Chemistry & Biochemistry > DePauw University > Greencastle IN 46135 USA > Web: academic.depauw.edu/~hanson/index.html > Repo: github.com/bryanhanson > Nerdy Blog: ChemoSpec.org > The Twit: @ProfBryanHanson > I’m usually @ -4 GMT/UTC > > R > sessionInfo() > R version 4.0.0 alpha (2020-03-29 r78109) > Platform: x86_64-apple-darwin17.0 (64-bit) > Running under: macOS Mojave 10.14.6 > > Matrix products: default > BLAS: > /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRblas.dylib > LAPACK: > /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRlapack.dylib > > locale: > [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 > > attached base packages: > [1] stats graphics grDevices utils datasets methods > [7] base > > loaded via a namespace (and not attached): > [1] compiler_4.0.0 > > > > > > > > > > > > > [[alternative HTML version deleted]] > > ___ > R-SIG-Mac mailing list > R-SIG-Mac@r-project.org > https://stat.ethz.ch/mailman/listinfo/r-sig-mac > ___ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac
Re: [R-SIG-Mac] PCRE JIT compilation error
Yes, sorry:
> osVersion
[1] "macOS Mojave 10.14.6"
> On 1 Apr 2020, at 16:14 , Prof Brian Ripley wrote:
>
> It seems to depend on the OS version: there are known issues with PCRE JIT
> and macOS 10.15 not just with R, but not for everyone.
>
> Similarly, installation issues of some Rcpp-using packages is only known to
> occur under 10.15 and not with 10.13 (which is what will be used for building
> binary packages and has been extensively tested there). These should go away
> with the next Rcpp update, available pro tem via
>
> install.packages("Rcpp", repos="https://rcppcore.github.io/drat;)
>
> So it really is necessary to remind people to follow the posting guide and
> include the output from sessionInfo() or at the very least
>
> > osVersion
> [1] "macOS Catalina 10.15.4"
>
>
> On 01/04/2020 14:37, peter dalgaard wrote:
>> Yes, this has been happening to a number of people, including Simon
>> Urbanek...
>> Oddly enough, I'm seeing nothing of the sort on my slightly different build
>> setup:
>> clang8 + gfortran6.1 as per https://cran.r-project.org/bin/macosx/tools
>> PCRE2 from http://mac.r-project.org/libs/
>> $ cat config.site
>> prefix=$HOME/tmp
>> CC=clang
>> CXX=clang++
>> with_blas="-framework vecLib"
>> with_lapack=yes
>> x_includes=/opt/X11/include
>> x_libraries=/opt/X11/lib
>> CURL_CONFIG=/usr/bin/curl-config
>> (And no, it is not because JIT is off:
>>> options("PCRE_use_JIT")
>> $PCRE_use_JIT
>> [1] TRUE
>> )
>> -pd
>>> On 1 Apr 2020, at 13:30 , Bryan Hanson wrote:
>>>
>>> On a fresh install of the binary from mac.r-project.org, if I simply do:
>>>
>>> library()
>>>
>>> I see:
>>>
>>> R > library()
>>> There were 30 warnings (use warnings() to see them)
>>> R > warnings()
>>> Warning messages:
>>> 1: In strsplit(x, "\n[ \t\n]*\n", perl = TRUE) : PCRE JIT compilation error
>>> 'no more memory'
>>> 2: In FUN(X[[i]], ...) : PCRE JIT compilation error
>>> 'no more memory'
>>>
>>> etc. The usual window with installed packages does open.
>>>
>>> Starting the conversation here on the Mac list, though it may be a bigger
>>> problem.
>>>
>>> Thanks, Bryan
>>>
>>> Prof. Bryan Hanson (emeritus)
>>> Dept of Chemistry & Biochemistry
>>> DePauw University
>>> Greencastle IN 46135 USA
>>> Web: academic.depauw.edu/~hanson/index.html
>>> Repo: github.com/bryanhanson
>>> Nerdy Blog: ChemoSpec.org
>>> The Twit: @ProfBryanHanson
>>> I’m usually @ -4 GMT/UTC
>>>
>>> R > sessionInfo()
>>> R version 4.0.0 alpha (2020-03-29 r78109)
>>> Platform: x86_64-apple-darwin17.0 (64-bit)
>>> Running under: macOS Mojave 10.14.6
>>>
>>> Matrix products: default
>>> BLAS:
>>> /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRblas.dylib
>>> LAPACK:
>>> /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRlapack.dylib
>>>
>>> locale:
>>> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>>>
>>> attached base packages:
>>> [1] stats graphics grDevices utils datasets methods
>>> [7] base
>>>
>>> loaded via a namespace (and not attached):
>>> [1] compiler_4.0.0
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>> [[alternative HTML version deleted]]
>>>
>>> ___
>>> R-SIG-Mac mailing list
>>> R-SIG-Mac@r-project.org
>>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
>
>
> --
> Brian D. Ripley, rip...@stats.ox.ac.uk
> Emeritus Professor of Applied Statistics, University of Oxford
--
Peter Dalgaard, Professor,
Center for Statistics, Copenhagen Business School
Solbjerg Plads 3, 2000 Frederiksberg, Denmark
Phone: (+45)38153501
Office: A 4.23
Email: pd@cbs.dk Priv: pda...@gmail.com
___
R-SIG-Mac mailing list
R-SIG-Mac@r-project.org
https://stat.ethz.ch/mailman/listinfo/r-sig-mac
Re: [R-SIG-Mac] PCRE JIT compilation error
It seems to depend on the OS version: there are known issues with PCRE
JIT and macOS 10.15 not just with R, but not for everyone.
Similarly, installation issues of some Rcpp-using packages is only known
to occur under 10.15 and not with 10.13 (which is what will be used for
building binary packages and has been extensively tested there). These
should go away with the next Rcpp update, available pro tem via
install.packages("Rcpp", repos="https://rcppcore.github.io/drat;)
So it really is necessary to remind people to follow the posting guide
and include the output from sessionInfo() or at the very least
> osVersion
[1] "macOS Catalina 10.15.4"
On 01/04/2020 14:37, peter dalgaard wrote:
Yes, this has been happening to a number of people, including Simon Urbanek...
Oddly enough, I'm seeing nothing of the sort on my slightly different build
setup:
clang8 + gfortran6.1 as per https://cran.r-project.org/bin/macosx/tools
PCRE2 from http://mac.r-project.org/libs/
$ cat config.site
prefix=$HOME/tmp
CC=clang
CXX=clang++
with_blas="-framework vecLib"
with_lapack=yes
x_includes=/opt/X11/include
x_libraries=/opt/X11/lib
CURL_CONFIG=/usr/bin/curl-config
(And no, it is not because JIT is off:
options("PCRE_use_JIT")
$PCRE_use_JIT
[1] TRUE
)
-pd
On 1 Apr 2020, at 13:30 , Bryan Hanson wrote:
On a fresh install of the binary from mac.r-project.org, if I simply do:
library()
I see:
R > library()
There were 30 warnings (use warnings() to see them)
R > warnings()
Warning messages:
1: In strsplit(x, "\n[ \t\n]*\n", perl = TRUE) : PCRE JIT compilation error
'no more memory'
2: In FUN(X[[i]], ...) : PCRE JIT compilation error
'no more memory'
etc. The usual window with installed packages does open.
Starting the conversation here on the Mac list, though it may be a bigger
problem.
Thanks, Bryan
Prof. Bryan Hanson (emeritus)
Dept of Chemistry & Biochemistry
DePauw University
Greencastle IN 46135 USA
Web: academic.depauw.edu/~hanson/index.html
Repo: github.com/bryanhanson
Nerdy Blog: ChemoSpec.org
The Twit: @ProfBryanHanson
I’m usually @ -4 GMT/UTC
R > sessionInfo()
R version 4.0.0 alpha (2020-03-29 r78109)
Platform: x86_64-apple-darwin17.0 (64-bit)
Running under: macOS Mojave 10.14.6
Matrix products: default
BLAS:
/Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRblas.dylib
LAPACK:
/Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRlapack.dylib
locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
attached base packages:
[1] stats graphics grDevices utils datasets methods
[7] base
loaded via a namespace (and not attached):
[1] compiler_4.0.0
[[alternative HTML version deleted]]
___
R-SIG-Mac mailing list
R-SIG-Mac@r-project.org
https://stat.ethz.ch/mailman/listinfo/r-sig-mac
--
Brian D. Ripley, rip...@stats.ox.ac.uk
Emeritus Professor of Applied Statistics, University of Oxford
___
R-SIG-Mac mailing list
R-SIG-Mac@r-project.org
https://stat.ethz.ch/mailman/listinfo/r-sig-mac
Re: [R-SIG-Mac] PCRE JIT compilation error
Yes, this has been happening to a number of people, including Simon Urbanek...
Oddly enough, I'm seeing nothing of the sort on my slightly different build
setup:
clang8 + gfortran6.1 as per https://cran.r-project.org/bin/macosx/tools
PCRE2 from http://mac.r-project.org/libs/
$ cat config.site
prefix=$HOME/tmp
CC=clang
CXX=clang++
with_blas="-framework vecLib"
with_lapack=yes
x_includes=/opt/X11/include
x_libraries=/opt/X11/lib
CURL_CONFIG=/usr/bin/curl-config
(And no, it is not because JIT is off:
> options("PCRE_use_JIT")
$PCRE_use_JIT
[1] TRUE
)
-pd
> On 1 Apr 2020, at 13:30 , Bryan Hanson wrote:
>
> On a fresh install of the binary from mac.r-project.org, if I simply do:
>
> library()
>
> I see:
>
> R > library()
> There were 30 warnings (use warnings() to see them)
> R > warnings()
> Warning messages:
> 1: In strsplit(x, "\n[ \t\n]*\n", perl = TRUE) : PCRE JIT compilation error
> 'no more memory'
> 2: In FUN(X[[i]], ...) : PCRE JIT compilation error
> 'no more memory'
>
> etc. The usual window with installed packages does open.
>
> Starting the conversation here on the Mac list, though it may be a bigger
> problem.
>
> Thanks, Bryan
>
> Prof. Bryan Hanson (emeritus)
> Dept of Chemistry & Biochemistry
> DePauw University
> Greencastle IN 46135 USA
> Web: academic.depauw.edu/~hanson/index.html
> Repo: github.com/bryanhanson
> Nerdy Blog: ChemoSpec.org
> The Twit: @ProfBryanHanson
> I’m usually @ -4 GMT/UTC
>
> R > sessionInfo()
> R version 4.0.0 alpha (2020-03-29 r78109)
> Platform: x86_64-apple-darwin17.0 (64-bit)
> Running under: macOS Mojave 10.14.6
>
> Matrix products: default
> BLAS:
> /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRblas.dylib
> LAPACK:
> /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRlapack.dylib
>
> locale:
> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>
> attached base packages:
> [1] stats graphics grDevices utils datasets methods
> [7] base
>
> loaded via a namespace (and not attached):
> [1] compiler_4.0.0
>
>
>
>
>
>
>
>
>
>
>
>
> [[alternative HTML version deleted]]
>
> ___
> R-SIG-Mac mailing list
> R-SIG-Mac@r-project.org
> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
--
Peter Dalgaard, Professor,
Center for Statistics, Copenhagen Business School
Solbjerg Plads 3, 2000 Frederiksberg, Denmark
Phone: (+45)38153501
Office: A 4.23
Email: pd@cbs.dk Priv: pda...@gmail.com
___
R-SIG-Mac mailing list
R-SIG-Mac@r-project.org
https://stat.ethz.ch/mailman/listinfo/r-sig-mac
Re: [R-SIG-Mac] PCRE JIT compilation error
Having played with things a bit more, this message appears all over the place as people are beginning to report. Another simple way to trigger it is to do: ?dist Bryan > On Apr 1, 2020, at 8:36 AM, Matthias Krawutschke > wrote: > > Hello together, > i´ve got this message too, but my systems show me first the list of all > installed libraries on my MAC. > > Best regards and take care…. > > > > Matthias Krawutschke, Dipl. Inf. > > Universität Potsdam > ZIM - Zentrum für Informationstechnologie und Medienmanagement > Team Infrastruktur Server und Storage > Spezialized: High-Performance-Computing and Kubernetes > > > Campus Am Neuen Palais: Am Neuen Palais 10 | 14469 Potsdam > Tel: +49 331 977-153065, Fax: +49 331 977-1750 > > Internet: https://www.uni-potsdam.de/de/zim/angebote-loesungen/hpc.html > > > -Ursprüngliche Nachricht- > Von: R-SIG-Mac Im Auftrag von Bryan Hanson > Gesendet: Mittwoch, 1. April 2020 13:30 > An: r-sig-mac R > Betreff: [R-SIG-Mac] PCRE JIT compilation error > > On a fresh install of the binary from mac.r-project.org, if I simply do: > > library() > > I see: > > R > library() > There were 30 warnings (use warnings() to see them) R > warnings() Warning > messages: > 1: In strsplit(x, "\n[ \t\n]*\n", perl = TRUE) : PCRE JIT compilation error > 'no more memory' > 2: In FUN(X[[i]], ...) : PCRE JIT compilation error > 'no more memory' > > etc. The usual window with installed packages does open. > > Starting the conversation here on the Mac list, though it may be a bigger > problem. > > Thanks, Bryan > > Prof. Bryan Hanson (emeritus) > Dept of Chemistry & Biochemistry > DePauw University > Greencastle IN 46135 USA > Web: academic.depauw.edu/~hanson/index.html > Repo: github.com/bryanhanson > Nerdy Blog: ChemoSpec.org > The Twit: @ProfBryanHanson > I’m usually @ -4 GMT/UTC > > R > sessionInfo() > R version 4.0.0 alpha (2020-03-29 r78109) > Platform: x86_64-apple-darwin17.0 (64-bit) Running under: macOS Mojave 10.14.6 > > Matrix products: default > BLAS: > /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRblas.dylib > LAPACK: > /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRlapack.dylib > > locale: > [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 > > attached base packages: > [1] stats graphics grDevices utils datasets methods > [7] base > > loaded via a namespace (and not attached): > [1] compiler_4.0.0 > > > > > > > > > > > > > [[alternative HTML version deleted]] > > ___ > R-SIG-Mac mailing list > R-SIG-Mac@r-project.org > https://stat.ethz.ch/mailman/listinfo/r-sig-mac > ___ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac
Re: [R-SIG-Mac] PCRE JIT compilation error
Hello together, i´ve got this message too, but my systems show me first the list of all installed libraries on my MAC. Best regards and take care…. Matthias Krawutschke, Dipl. Inf. Universität Potsdam ZIM - Zentrum für Informationstechnologie und Medienmanagement Team Infrastruktur Server und Storage Spezialized: High-Performance-Computing and Kubernetes Campus Am Neuen Palais: Am Neuen Palais 10 | 14469 Potsdam Tel: +49 331 977-153065, Fax: +49 331 977-1750 Internet: https://www.uni-potsdam.de/de/zim/angebote-loesungen/hpc.html -Ursprüngliche Nachricht- Von: R-SIG-Mac Im Auftrag von Bryan Hanson Gesendet: Mittwoch, 1. April 2020 13:30 An: r-sig-mac R Betreff: [R-SIG-Mac] PCRE JIT compilation error On a fresh install of the binary from mac.r-project.org, if I simply do: library() I see: R > library() There were 30 warnings (use warnings() to see them) R > warnings() Warning messages: 1: In strsplit(x, "\n[ \t\n]*\n", perl = TRUE) : PCRE JIT compilation error 'no more memory' 2: In FUN(X[[i]], ...) : PCRE JIT compilation error 'no more memory' etc. The usual window with installed packages does open. Starting the conversation here on the Mac list, though it may be a bigger problem. Thanks, Bryan Prof. Bryan Hanson (emeritus) Dept of Chemistry & Biochemistry DePauw University Greencastle IN 46135 USA Web: academic.depauw.edu/~hanson/index.html Repo: github.com/bryanhanson Nerdy Blog: ChemoSpec.org The Twit: @ProfBryanHanson I’m usually @ -4 GMT/UTC R > sessionInfo() R version 4.0.0 alpha (2020-03-29 r78109) Platform: x86_64-apple-darwin17.0 (64-bit) Running under: macOS Mojave 10.14.6 Matrix products: default BLAS: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRblas.dylib LAPACK: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRlapack.dylib locale: [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 attached base packages: [1] stats graphics grDevices utils datasets methods [7] base loaded via a namespace (and not attached): [1] compiler_4.0.0 [[alternative HTML version deleted]] ___ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac ___ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac
[R-SIG-Mac] PCRE JIT compilation error
On a fresh install of the binary from mac.r-project.org, if I simply do: library() I see: R > library() There were 30 warnings (use warnings() to see them) R > warnings() Warning messages: 1: In strsplit(x, "\n[ \t\n]*\n", perl = TRUE) : PCRE JIT compilation error 'no more memory' 2: In FUN(X[[i]], ...) : PCRE JIT compilation error 'no more memory' etc. The usual window with installed packages does open. Starting the conversation here on the Mac list, though it may be a bigger problem. Thanks, Bryan Prof. Bryan Hanson (emeritus) Dept of Chemistry & Biochemistry DePauw University Greencastle IN 46135 USA Web: academic.depauw.edu/~hanson/index.html Repo: github.com/bryanhanson Nerdy Blog: ChemoSpec.org The Twit: @ProfBryanHanson I’m usually @ -4 GMT/UTC R > sessionInfo() R version 4.0.0 alpha (2020-03-29 r78109) Platform: x86_64-apple-darwin17.0 (64-bit) Running under: macOS Mojave 10.14.6 Matrix products: default BLAS: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRblas.dylib LAPACK: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRlapack.dylib locale: [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 attached base packages: [1] stats graphics grDevices utils datasets methods [7] base loaded via a namespace (and not attached): [1] compiler_4.0.0 [[alternative HTML version deleted]] ___ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac
