[R-SIG-Mac] mac OS X 10.5.7 rgdal installation problems

2009-07-02 Thread stephen sefick
. Stephen Sefick On Thu, Jul 2, 2009 at 10:05 AM, stephen sefickssef...@gmail.com wrote: platform i386-apple-darwin8.11.1 arch i386 os darwin8.11.1 system i386, darwin8.11.1 status major 2 minor 9.1 year 2009 month 06 day

Re: [R-SIG-Mac] mac OS X 10.5.7 rgdal installation problems

2009-07-02 Thread stephen sefick
, 2009, at 08:47 , stephen sefick wrote: sudo R CMD install --configure-args='--with-proj-include=/sw/bin/proj' rgdal_0.6-9.tar.gz * Installing to library ‘/Library/Frameworks/R.framework/Resources/library’ * Installing *source* package ‘rgdal’ ... gdal-config: gdal-config checking for gcc

Re: [R-SIG-Mac] mac OS X 10.5.7 rgdal installation problems

2009-07-02 Thread stephen sefick
here is everything so far, and I still don't know what is going on. thanks, Stephen Sefick Command: which gcc output: /usr/bin/gcc Command: R CMD install --configure-args='--with-proj-include=/sw/include/proj' rgdal Command Output: Installing to library ‘/Library/Frameworks/R.framework

Re: [R-SIG-Mac] mac OS X 10.5.7 rgdal installation problems

2009-07-02 Thread stephen sefick
to say -configure-args='--with-proj-include=/sw/include/' On Jul 2, 2009, at 12:15 , stephen sefick wrote: proj_api.h === Jan de Leeuw; Distinguished Professor and Chair, UCLA Department of Statistics; Director: UCLA Center for Environmental Statistics (CES); Editor: Journal of Multivariate

Re: [R-SIG-Mac] mac OS X 10.5.7 rgdal installation problems

2009-07-02 Thread stephen sefick
, at 3:29 PM, stephen sefick wrote: locate proj_api.h /Applications/GrassGIS.app/Contents/Resources/app/grass-6.3.0/include/gproj_api.h /Applications/GrassGIS.app/Contents/Resources/app/grass-6.3.0/include/grass/gproj_api.h /Applications/GrassGIS.app/Contents/Resources/app/x11/grass-6.3.0

Re: [R-SIG-Mac] mac OS X 10.5.7 rgdal installation problems

2009-07-02 Thread stephen sefick
, Biophysics and Systems Biology Weill Medical College of Cornell University Contact Info: http://cbio.mskcc.org/~lianos/contact -- Stephen Sefick Let's not spend our time and resources thinking about things that are so little or so large that all they really do for us is puff us up and make us

Re: [R-SIG-Mac] sowas in Mac - wavelet analysis with Rwave

2009-06-22 Thread stephen sefick
@stat.math.ethz.ch https://stat.ethz.ch/mailman/listinfo/r-sig-mac -- Stephen Sefick Let's not spend our time and resources thinking about things that are so little or so large that all they really do for us is puff us up and make us feel like gods. We are mammals, and have not exhausted

Re: [R-SIG-Mac] sowas in Mac - wavelet analysis with Rwave

2009-06-22 Thread stephen sefick
.                                                                -K. Mullis -- Stephen Sefick Let's not spend our time and resources thinking about things that are so little or so large that all they really do for us is puff us up and make us feel like gods. We are mammals, and have not exhausted the annoying little problems

Re: [R-SIG-Mac] R for Mac

2009-05-01 Thread stephen sefick
I think all of the packages are available as source. You can look at ?install.packages to see how to use this from within R or look a R CMD install in a terminal window. hope this helps, Stephen Sefick On Fri, May 1, 2009 at 10:26 AM, Don MacQueen m...@llnl.gov wrote: At 5:04 PM -0400 4/30/09

[R-SIG-Mac] installing multiple versions of R

2008-12-01 Thread stephen sefick
I would like to install R 2.7.2 in || with R 2.8 to test what is wrong with a package I am maintaining. It worked fine with R 2.7.2 chron 2.3-24 and doesn't work with R 2.8 chron 2.3-24 or chron 2.3-25. thanks -- Stephen Sefick Let's not spend our time and resources thinking about things

Re: [R-SIG-Mac] installing multiple versions of R

2008-12-01 Thread stephen sefick
I downloaded the Rswitch application, but the current version and that is the only version that is available even if I push the rediscover button. On Mon, Dec 1, 2008 at 11:46 AM, Steve Lianoglou [EMAIL PROTECTED] wrote: Hi Stephen, On Dec 1, 2008, at 11:29 AM, stephen sefick wrote: I would

Re: [R-SIG-Mac] installing multiple versions of R

2008-12-01 Thread stephen sefick
using the appropriate leopard/tiger builds? -steve On Mon, Dec 1, 2008 at 11:46 AM, Steve Lianoglou [EMAIL PROTECTED] wrote: Hi Stephen, On Dec 1, 2008, at 11:29 AM, stephen sefick wrote: I would like to install R 2.7.2 in || with R 2.8 to test what is wrong with a package I am

Re: [R-SIG-Mac] RMatlab

2008-10-30 Thread stephen sefick
://stat.ethz.ch/mailman/listinfo/r-sig-mac -- Stephen Sefick Research Scientist Southeastern Natural Sciences Academy Let's not spend our time and resources thinking about things that are so little or so large that all they really do for us is puff us up and make us feel like gods. We

Re: [R-SIG-Mac] problematic MACOSX_DEPLOYMENT_TARGET

2008-10-22 Thread stephen sefick
-SIG-Mac mailing list R-SIG-Mac@stat.math.ethz.ch https://stat.ethz.ch/mailman/listinfo/r-sig-mac ___ R-SIG-Mac mailing list R-SIG-Mac@stat.math.ethz.ch https://stat.ethz.ch/mailman/listinfo/r-sig-mac -- Stephen Sefick Research Scientist

[R-SIG-Mac] 2.8.0 compiled and installed on mac os x 10.3 - parallel install with 2.7.2 how to make R run R 2.8.0

2008-10-21 Thread stephen sefick
this lacks is ibook G4 256 RAM os x 10.3.9 thanks -- Stephen Sefick Research Scientist Southeastern Natural Sciences Academy Let's not spend our time and resources thinking about things that are so little or so large that all they really do for us is puff us up and make us feel like gods. We

Re: [R-SIG-Mac] X11 with aquamacs

2008-10-15 Thread stephen sefick
.Rprofile in the home directory, but indeed it doesn't work (which simply means I don't know what i am doing). thanks Stephen On Wed, Oct 15, 2008 at 9:51 AM, Prof Brian Ripley [EMAIL PROTECTED] wrote: On Wed, 15 Oct 2008, Vincent Goulet wrote: Le lun. 6 oct. à 12:09, stephen sefick a écrit

[R-SIG-Mac] X11 with aquamacs

2008-10-06 Thread stephen sefick
with x11. thanks -- Stephen Sefick Research Scientist Southeastern Natural Sciences Academy Let's not spend our time and resources thinking about things that are so little or so large that all they really do for us is puff us up and make us feel like gods. We are mammals, and have not exhausted

Re: [R-SIG-Mac] R 2.7.2 for Mac OS X released

2008-09-22 Thread stephen sefick
Zürich. Hope you can help me! Thanks a lot and best wishes Anastassia Scheidegger ___ R-SIG-Mac mailing list R-SIG-Mac@stat.math.ethz.ch https://stat.ethz.ch/mailman/listinfo/r-sig-mac -- Stephen Sefick Research Scientist Southeastern

[R-SIG-Mac] Fwd: making binaries for os x 10.3.9

2008-09-21 Thread stephen sefick
-- Forwarded message -- From: stephen sefick [EMAIL PROTECTED] Date: Sun, Sep 21, 2008 at 3:09 PM Subject: making binaries for os x 10.3.9 To: R-help Mailing List [EMAIL PROTECTED] I am going to try and build r from source on a 10.3.9 machine. I would like to have

[R-SIG-Mac] x11 10.3.9

2008-09-21 Thread stephen sefick
I am trying to compile R 2.7.2 from source and running the ./configure command ends with configure: error: --with-x=yes (default) and X11 headers/libs are not available I have found out that apple X11 is broken but I can not figure out how to fix it. thanks -- Stephen Sefick Research

Re: [R-SIG-Mac] x11 10.3.9

2008-09-21 Thread stephen sefick
PROTECTED] wrote: On Sun, Sep 21, 2008 at 5:31 PM, stephen sefick [EMAIL PROTECTED] wrote: I am trying to compile R 2.7.2 from source and running the ./configure command ends with configure: error: --with-x=yes (default) and X11 headers/libs are not available I have found out that apple X11

[R-SIG-Mac] compilation error 10.3.9 (I don't believe that I can make this reporducible)

2008-09-21 Thread stephen sefick
#if make[3]: *** [aqua.d] Error 1 make[2]: *** [R] Error 2 make[1]: *** [R] Error 1 make: *** [R] Error 1 -- Stephen Sefick Research Scientist Southeastern Natural Sciences Academy Let's not spend our time and resources thinking about things that are so little or so large that all they really

[R-SIG-Mac] 2.7.2 compiled on os x 10.3.9 now how do I get R to run by just typing R

2008-09-21 Thread stephen sefick
/Library/Frameworks/R.framework/Versions/2.7/Resources and then type . /R R starts up- how do I get it to work from anywhere with just issuing the command R at the command prompt. Thanks for your help, -- Stephen Sefick Research Scientist Southeastern Natural Sciences Academy Let's not spend

Re: [R-SIG-Mac] Building R 10.3.9

2008-09-17 Thread stephen sefick
. Thanks Stephen Sefick Research Scientist Southeastern Natural Sciences Academy Let's not spend our time and resources thinking about things that are so little or so large that all they really do for us is puff us up and make us feel like gods. We are mammals, and have not exhausted the annoying

Re: [R-SIG-Mac] BiodiversityR

2008-09-08 Thread stephen sefick
/listinfo/r-sig-mac -- Stephen Sefick Research Scientist Southeastern Natural Sciences Academy Let's not spend our time and resources thinking about things that are so little or so large that all they really do for us is puff us up and make us feel like gods. We are mammals, and have not exhausted

[R-SIG-Mac] LaTeX for mac- problem making documentation files HELP!

2008-08-06 Thread stephen sefick
... * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking data for non-ASCII characters ... OK * creating Ecosystem.Production-Ex.R

Re: [R-SIG-Mac] Tex for producing packages (and whatever else)

2008-08-01 Thread stephen sefick
:32 AM, stephen sefick [EMAIL PROTECTED] wrote: I did load the the data in a fresh session, and then plotted it, but I will make sure that it doesn't reside in memory when I get home. I am at work now and don't have access to my machine at home. There is a lot of help on the cran website

Re: [R-SIG-Mac] Tex for producing packages (and whatever else)

2008-08-01 Thread stephen sefick
.Rdata has to be .RData thanks for the help On Fri, Aug 1, 2008 at 11:23 AM, stephen sefick [EMAIL PROTECTED] wrote: Load works fine- I tried this in a fresh R session. SavannahRiver.Rdata is 4KB. the data folder resides in the first level of the directory tree- /Ecosystem.Production/data

[R-SIG-Mac] Tex for producing packages (and whatever else)

2008-07-31 Thread stephen sefick
Mac 10.5.4 R 2.7.1 I am in the process of making a package what else do I need besides the known Tex stuff, and which one. I have heard that miktex doesn't play nicely. -- Let's not spend our time and resources thinking about things that are so little or so large that all they really do for us

Re: [R-SIG-Mac] Tex for producing packages (and whatever else)

2008-07-31 Thread stephen sefick
I did load the the data in a fresh session, and then plotted it, but I will make sure that it doesn't reside in memory when I get home. I am at work now and don't have access to my machine at home. There is a lot of help on the cran website and elsewhere, but it is sometimes unwieldy to find the

Re: [R-SIG-Mac] Weird problems in Leopard

2008-07-16 Thread stephen sefick
you have all of the compiliers necessary? There goes a shot in the dark On Wed, Jul 16, 2008 at 4:55 PM, Duncan Murdoch [EMAIL PROTECTED] wrote: I've just bought a new iMac with 10.5.4 of OS X. I installed R 2.7.1 on it with no problems. I tried to install Xcode 3.0, but three downloads