On Thu, 20 Oct 2011, Burgette, Lane wrote:
Hi Everyone,
I'm having problems installing a package locally from source on my
Mac. It was developed on a Windows 7 machine (x86-64) and loads
without incident under Windows (both x86-32 and x86-64) and Linux.
When I try to install, it steps through a bunch of g++ calls, and
then gives the following error message:
The actual command here has been truncated ....
L/Library/Frameworks/R.framework/Resources/lib/x86_64 -lRblas
-lgfortran -F/Library/Frameworks/R.framework/.. -framework R
-Wl,-framework -Wl,CoreFoundation
/Library/Frameworks/R.framework/Versions/2.13/Resources/library/Rcpp/lib/x86_64/libRcpp.a:
line 1: syntax error near unexpected token `newline'
/Library/Frameworks/R.framework/Versions/2.13/Resources/library/Rcpp/lib/x86_64/libRcpp.a:
line 1: `!<arch>' installing to
/Library/Frameworks/R.framework/Versions/2.13/Resources/library/growcurves/libs/x86_64
In the end, it fails to load. (See below.) I assume this is due to these
errors. Any thoughts as to what I am doing wrong?
I don't think you are: the problem seems to be in the way Rcpp's
library is built. You could try rebuilding it, then ask on Rcpp's
lists.
Thanks,
Lane
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared object
'/Library/Frameworks/R.framework/Versions/2.13/Resources/library/growcurves/libs/x86_64/growcurves.so':
dlopen(/Library/Frameworks/R.framework/Versions/2.13/Resources/library/growcurves/libs/x86_64/growcurves.so,
6): Symbol not found: __ZTIN4Rcpp12not_a_matrixE
Referenced from:
/Library/Frameworks/R.framework/Versions/2.13/Resources/library/growcurves/libs/x86_64/growcurves.so
Expected in: flat namespace
in
/Library/Frameworks/R.framework/Versions/2.13/Resources/library/growcurves/libs/x86_64/growcurves.so
Error: loading failed
Execution halted
ERROR: loading failed
* removing
'/Library/Frameworks/R.framework/Versions/2.13/Resources/library/growcurves'
sessionInfo()
R version 2.13.2 (2011-09-30)
Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
locale:
[1] en_US.UTF-8/en_US.UTF-8/C/C/en_US.UTF-8/en_US.UTF-8
attached base packages:
[1] grid stats graphics grDevices utils datasets methods base
other attached packages:
[1] ggplot2_0.8.9 proto_0.3-9.2 reshape_0.8.4 plyr_1.6
RcppArmadillo_0.2.29
[6] Rcpp_0.9.7
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--
Brian D. Ripley, rip...@stats.ox.ac.uk
Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/
University of Oxford, Tel: +44 1865 272861 (self)
1 South Parks Road, +44 1865 272866 (PA)
Oxford OX1 3TG, UK Fax: +44 1865 272595
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