Re: [R-SIG-Mac] R crashes on preferences screen

2013-11-12 Thread John Magnotti 
no more crashing for me

thanks!

John

> sessionInfo()
R version 3.0.2 Patched (2013-11-11 r64202)
Platform: x86_64-apple-darwin10.8.0 (64-bit)

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] stats graphics  grDevices utils datasets  methods   base


On Sun, Nov 10, 2013 at 9:33 AM, Robert J Goedman  wrote:
> Could someone with the preference problems try the latest nightly build for 
> R.app to see if the patch helps?
>
> Thanks,
> Rob J. Goedman
> [email protected]
>
>
>
> On Nov 8, 2013, at 6:58 AM, Robert J Goedman  wrote:
>
>> Hi,
>>
>> Thanks for the feedback/updates. The flashing of the color chooser has been 
>> there for a long time but I don't think that is causing this problem.
>>
>> I can trigger the problem in Xcode and it shows clearly where it crashes. 
>> Its attempting to darken an icon image, pixel by pixel, but the image has no 
>> data if (on our systems at least) the 'Set Color' is not used as the path to 
>> get there.
>>
>> From what I've seen, it happens on a range of systems - below my 
>> sessionInfo(). The work around is simple and I think innocuous enough that I 
>> think I can commit. But it not very satisfactory not to get to the bottom of 
>> this and to understand why only some of us encounter this problem.
>>
>> Rob J. Goedman
>> [email protected]
>>
>>
>>
>> [R.app GUI 1.62 (6588) x86_64-apple-darwin13.0.0]
>>
>> [Workspace restored from /Users/rob/Projects/.RData]
>> [History restored from /Users/rob/Projects/.Rapp.history]
>>
>> 2013-11-08 06:42:18.669 R[65942:707] No data in destData 
>> (darkenedImageWithColor.m)
>>> sessionInfo()
>> R Under development (unstable) (2013-10-30 r64123)
>> Platform: x86_64-apple-darwin13.0.0/x86_64 (64-bit)
>>
>> locale:
>> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>>
>> attached base packages:
>> [1] stats graphics  grDevices utils datasets  methods   base
>>
>> loaded via a namespace (and not attached):
>> [1] coda_0.16-1 grid_3.1.0  inline_0.3.13   lattice_0.20-25 
>> Rcpp_0.10.6 rjags_3-11  rstan_2.0.1
>> [8] stats4_3.1.0
>>>
>>
>>
>> On Nov 8, 2013, at 3:00 AM, peter dalgaard  wrote:
>>
>>> I was just about to tell you guys that have the problem to try running 
>>> R.app with gdb attached to the process. Then I realized that gdb has gone 
>>> in Mavericks to be replaced by lldb, which I don't have much of a clue 
>>> about how to operate
>>>
>>> However, at least the first few steps seem to be similar to using gdb:
>>>
>>> Get the process ID for R.app using
>>>
>>> Peters-iMac:~ pd$ ps aux | grep R.app
>>> pd  28620   0.1  0.5  3877356  21724   ??  S 1Nov13   
>>> 0:43.29 /Applications/R.app/Contents/MacOS/R
>>> pd  74190   0.0  0.0  2432784596 s005  S+   11:45AM   
>>> 0:00.01 grep R.app
>>>
>>> Then attach to it using
>>>
>>> Peters-iMac:~ pd$ lldb -p 28620
>>>
>>> give your password to allow the debugger to control the process, then, when 
>>> lldb fires up, tell it to resume the process
>>>
>>> (lldb) continue
>>> Process 28620 resuming
>>>
>>> Next, you should try doing whatever it takes to reproduce the crash, figure 
>>> out how to get a traceback, and report back to the list.
>>>
>>> -pd
>>>
>>> On 07 Nov 2013, at 10:19 , Rainer M Krug  wrote:
>>>
 I have to confirm both, the crash and the flashing of the colour wheel.


> sessionInfo()
 R version 3.0.2 (2013-09-25)
 Platform: x86_64-apple-darwin10.8.0 (64-bit)

 locale:
 [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

 attached base packages:
 [1] stats graphics  grDevices utils datasets  methods   base
> version
 _
 platform   x86_64-apple-darwin10.8.0
 arch   x86_64
 os darwin10.8.0
 system x86_64, darwin10.8.0
 status
 major  3
 minor  0.2
 year   2013
 month  09
 day25
 svn rev63987
 language   R
 version.string R version 3.0.2 (2013-09-25)
 nickname   Frisbee Sailing
>

 Cheers,

 Rainer



 On 11/07/13, 02:17 , John Magnotti wrote:
> I removed my current R.app and installed the one at:
> http://r.research.att.com/#GUI
> R-3.0-branch-snowleopard-signed.pkg
>
> but I still get an immediate crash when I 1) open the preferences
> window and 2) click any of the icons in the main "Show All" screen
> (but not the tabs)
>
> I also noticed that switching away from either the Color or the Syntax
> tab briefly flashes (open then close) the color wheel selection dialog
>
>> sessionInfo()
> R version 3.0.2 Patched (2013-11-04 r64155)
> Platform: x86_64-apple-darwin10.8.0 (64-bit)
>
> locale:
> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>
> attached base packages:

Re: [R-SIG-Mac] R crashes on preferences screen

2013-11-10 Thread Robert J Goedman 
Could someone with the preference problems try the latest nightly build for 
R.app to see if the patch helps?

Thanks,
Rob J. Goedman
[email protected]



On Nov 8, 2013, at 6:58 AM, Robert J Goedman  wrote:

> Hi,
> 
> Thanks for the feedback/updates. The flashing of the color chooser has been 
> there for a long time but I don't think that is causing this problem.
> 
> I can trigger the problem in Xcode and it shows clearly where it crashes. Its 
> attempting to darken an icon image, pixel by pixel, but the image has no data 
> if (on our systems at least) the 'Set Color' is not used as the path to get 
> there.
> 
> From what I've seen, it happens on a range of systems - below my 
> sessionInfo(). The work around is simple and I think innocuous enough that I 
> think I can commit. But it not very satisfactory not to get to the bottom of 
> this and to understand why only some of us encounter this problem.
> 
> Rob J. Goedman
> [email protected]
> 
> 
> 
> [R.app GUI 1.62 (6588) x86_64-apple-darwin13.0.0]
> 
> [Workspace restored from /Users/rob/Projects/.RData]
> [History restored from /Users/rob/Projects/.Rapp.history]
> 
> 2013-11-08 06:42:18.669 R[65942:707] No data in destData 
> (darkenedImageWithColor.m)
>> sessionInfo()
> R Under development (unstable) (2013-10-30 r64123)
> Platform: x86_64-apple-darwin13.0.0/x86_64 (64-bit)
> 
> locale:
> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
> 
> attached base packages:
> [1] stats graphics  grDevices utils datasets  methods   base 
> 
> loaded via a namespace (and not attached):
> [1] coda_0.16-1 grid_3.1.0  inline_0.3.13   lattice_0.20-25 
> Rcpp_0.10.6 rjags_3-11  rstan_2.0.1
> [8] stats4_3.1.0   
>> 
> 
> 
> On Nov 8, 2013, at 3:00 AM, peter dalgaard  wrote:
> 
>> I was just about to tell you guys that have the problem to try running R.app 
>> with gdb attached to the process. Then I realized that gdb has gone in 
>> Mavericks to be replaced by lldb, which I don't have much of a clue about 
>> how to operate
>> 
>> However, at least the first few steps seem to be similar to using gdb:
>> 
>> Get the process ID for R.app using
>> 
>> Peters-iMac:~ pd$ ps aux | grep R.app
>> pd  28620   0.1  0.5  3877356  21724   ??  S 1Nov13   
>> 0:43.29 /Applications/R.app/Contents/MacOS/R
>> pd  74190   0.0  0.0  2432784596 s005  S+   11:45AM   
>> 0:00.01 grep R.app
>> 
>> Then attach to it using
>> 
>> Peters-iMac:~ pd$ lldb -p 28620
>> 
>> give your password to allow the debugger to control the process, then, when 
>> lldb fires up, tell it to resume the process
>> 
>> (lldb) continue
>> Process 28620 resuming
>> 
>> Next, you should try doing whatever it takes to reproduce the crash, figure 
>> out how to get a traceback, and report back to the list.
>> 
>> -pd
>> 
>> On 07 Nov 2013, at 10:19 , Rainer M Krug  wrote:
>> 
>>> I have to confirm both, the crash and the flashing of the colour wheel.
>>> 
>>> 
 sessionInfo()
>>> R version 3.0.2 (2013-09-25)
>>> Platform: x86_64-apple-darwin10.8.0 (64-bit)
>>> 
>>> locale:
>>> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>>> 
>>> attached base packages:
>>> [1] stats graphics  grDevices utils datasets  methods   base
 version
>>> _
>>> platform   x86_64-apple-darwin10.8.0
>>> arch   x86_64
>>> os darwin10.8.0
>>> system x86_64, darwin10.8.0
>>> status
>>> major  3
>>> minor  0.2
>>> year   2013
>>> month  09
>>> day25
>>> svn rev63987
>>> language   R
>>> version.string R version 3.0.2 (2013-09-25)
>>> nickname   Frisbee Sailing
 
>>> 
>>> Cheers,
>>> 
>>> Rainer
>>> 
>>> 
>>> 
>>> On 11/07/13, 02:17 , John Magnotti wrote:
 I removed my current R.app and installed the one at:
 http://r.research.att.com/#GUI
 R-3.0-branch-snowleopard-signed.pkg
 
 but I still get an immediate crash when I 1) open the preferences
 window and 2) click any of the icons in the main "Show All" screen
 (but not the tabs)
 
 I also noticed that switching away from either the Color or the Syntax
 tab briefly flashes (open then close) the color wheel selection dialog
 
> sessionInfo()
 R version 3.0.2 Patched (2013-11-04 r64155)
 Platform: x86_64-apple-darwin10.8.0 (64-bit)
 
 locale:
 [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
 
 attached base packages:
 [1] stats graphics  grDevices utils datasets  methods   base
 
 
 Is there any other specific information that would help?
 
 Thanks,
 
 John
 
 On Wed, Nov 6, 2013 at 10:12 AM, Brandon Hurr  wrote:
> Robert,
> 
> I never could reproduce what Brian, John or Ranier were seeing with my
> install (downloaded from http://r.research.att.com/ .
> 
> Perhaps they could chime back in and give you more

Re: [R-SIG-Mac] R crashes on preferences screen

2013-11-08 Thread Robert J Goedman 
Hi,

Thanks for the feedback/updates. The flashing of the color chooser has been 
there for a long time but I don't think that is causing this problem.

I can trigger the problem in Xcode and it shows clearly where it crashes. Its 
attempting to darken an icon image, pixel by pixel, but the image has no data 
if (on our systems at least) the 'Set Color' is not used as the path to get 
there.

>From what I've seen, it happens on a range of systems - below my 
>sessionInfo(). The work around is simple and I think innocuous enough that I 
>think I can commit. But it not very satisfactory not to get to the bottom of 
>this and to understand why only some of us encounter this problem.

Rob J. Goedman
[email protected]



[R.app GUI 1.62 (6588) x86_64-apple-darwin13.0.0]

[Workspace restored from /Users/rob/Projects/.RData]
[History restored from /Users/rob/Projects/.Rapp.history]

2013-11-08 06:42:18.669 R[65942:707] No data in destData 
(darkenedImageWithColor.m)
> sessionInfo()
R Under development (unstable) (2013-10-30 r64123)
Platform: x86_64-apple-darwin13.0.0/x86_64 (64-bit)

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] stats graphics  grDevices utils datasets  methods   base 

loaded via a namespace (and not attached):
[1] coda_0.16-1 grid_3.1.0  inline_0.3.13   lattice_0.20-25 Rcpp_0.10.6 
rjags_3-11  rstan_2.0.1
[8] stats4_3.1.0   
> 


On Nov 8, 2013, at 3:00 AM, peter dalgaard  wrote:

> I was just about to tell you guys that have the problem to try running R.app 
> with gdb attached to the process. Then I realized that gdb has gone in 
> Mavericks to be replaced by lldb, which I don't have much of a clue about how 
> to operate
> 
> However, at least the first few steps seem to be similar to using gdb:
> 
> Get the process ID for R.app using
> 
> Peters-iMac:~ pd$ ps aux | grep R.app
> pd  28620   0.1  0.5  3877356  21724   ??  S 1Nov13   0:43.29 
> /Applications/R.app/Contents/MacOS/R
> pd  74190   0.0  0.0  2432784596 s005  S+   11:45AM   0:00.01 
> grep R.app
> 
> Then attach to it using
> 
> Peters-iMac:~ pd$ lldb -p 28620
> 
> give your password to allow the debugger to control the process, then, when 
> lldb fires up, tell it to resume the process
> 
> (lldb) continue
> Process 28620 resuming
> 
> Next, you should try doing whatever it takes to reproduce the crash, figure 
> out how to get a traceback, and report back to the list.
> 
> -pd
> 
> On 07 Nov 2013, at 10:19 , Rainer M Krug  wrote:
> 
>> I have to confirm both, the crash and the flashing of the colour wheel.
>> 
>> 
>>> sessionInfo()
>> R version 3.0.2 (2013-09-25)
>> Platform: x86_64-apple-darwin10.8.0 (64-bit)
>> 
>> locale:
>> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>> 
>> attached base packages:
>> [1] stats graphics  grDevices utils datasets  methods   base
>>> version
>>  _
>> platform   x86_64-apple-darwin10.8.0
>> arch   x86_64
>> os darwin10.8.0
>> system x86_64, darwin10.8.0
>> status
>> major  3
>> minor  0.2
>> year   2013
>> month  09
>> day25
>> svn rev63987
>> language   R
>> version.string R version 3.0.2 (2013-09-25)
>> nickname   Frisbee Sailing
>>> 
>> 
>> Cheers,
>> 
>> Rainer
>> 
>> 
>> 
>> On 11/07/13, 02:17 , John Magnotti wrote:
>>> I removed my current R.app and installed the one at:
>>> http://r.research.att.com/#GUI
>>> R-3.0-branch-snowleopard-signed.pkg
>>> 
>>> but I still get an immediate crash when I 1) open the preferences
>>> window and 2) click any of the icons in the main "Show All" screen
>>> (but not the tabs)
>>> 
>>> I also noticed that switching away from either the Color or the Syntax
>>> tab briefly flashes (open then close) the color wheel selection dialog
>>> 
 sessionInfo()
>>> R version 3.0.2 Patched (2013-11-04 r64155)
>>> Platform: x86_64-apple-darwin10.8.0 (64-bit)
>>> 
>>> locale:
>>> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>>> 
>>> attached base packages:
>>> [1] stats graphics  grDevices utils datasets  methods   base
>>> 
>>> 
>>> Is there any other specific information that would help?
>>> 
>>> Thanks,
>>> 
>>> John
>>> 
>>> On Wed, Nov 6, 2013 at 10:12 AM, Brandon Hurr  wrote:
 Robert,
 
 I never could reproduce what Brian, John or Ranier were seeing with my
 install (downloaded from http://r.research.att.com/ .
 
 Perhaps they could chime back in and give you more details.
 
 I'm now running Mavericks and still cannot replicate.
 R version 3.0.2 (2013-09-25)
 Platform: x86_64-apple-darwin10.8.0 (64-bit)
 
 locale:
 [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
 
 attached base packages:
 [1] stats graphics  grDevices utils datasets  methods   base
 
 Brandon
 
 
 On Wed

Re: [R-SIG-Mac] R crashes on preferences screen

2013-11-08 Thread peter dalgaard 
I was just about to tell you guys that have the problem to try running R.app 
with gdb attached to the process. Then I realized that gdb has gone in 
Mavericks to be replaced by lldb, which I don't have much of a clue about how 
to operate

However, at least the first few steps seem to be similar to using gdb:

Get the process ID for R.app using

Peters-iMac:~ pd$ ps aux | grep R.app
pd  28620   0.1  0.5  3877356  21724   ??  S 1Nov13   0:43.29 
/Applications/R.app/Contents/MacOS/R
pd  74190   0.0  0.0  2432784596 s005  S+   11:45AM   0:00.01 
grep R.app

Then attach to it using

Peters-iMac:~ pd$ lldb -p 28620

give your password to allow the debugger to control the process, then, when 
lldb fires up, tell it to resume the process

(lldb) continue
Process 28620 resuming

Next, you should try doing whatever it takes to reproduce the crash, figure out 
how to get a traceback, and report back to the list.

-pd

On 07 Nov 2013, at 10:19 , Rainer M Krug  wrote:

> I have to confirm both, the crash and the flashing of the colour wheel.
> 
> 
>> sessionInfo()
> R version 3.0.2 (2013-09-25)
> Platform: x86_64-apple-darwin10.8.0 (64-bit)
> 
> locale:
> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
> 
> attached base packages:
> [1] stats graphics  grDevices utils datasets  methods   base
>> version
>   _
> platform   x86_64-apple-darwin10.8.0
> arch   x86_64
> os darwin10.8.0
> system x86_64, darwin10.8.0
> status
> major  3
> minor  0.2
> year   2013
> month  09
> day25
> svn rev63987
> language   R
> version.string R version 3.0.2 (2013-09-25)
> nickname   Frisbee Sailing
>> 
> 
> Cheers,
> 
> Rainer
> 
> 
> 
> On 11/07/13, 02:17 , John Magnotti wrote:
>> I removed my current R.app and installed the one at:
>> http://r.research.att.com/#GUI
>> R-3.0-branch-snowleopard-signed.pkg
>> 
>> but I still get an immediate crash when I 1) open the preferences
>> window and 2) click any of the icons in the main "Show All" screen
>> (but not the tabs)
>> 
>> I also noticed that switching away from either the Color or the Syntax
>> tab briefly flashes (open then close) the color wheel selection dialog
>> 
>>> sessionInfo()
>> R version 3.0.2 Patched (2013-11-04 r64155)
>> Platform: x86_64-apple-darwin10.8.0 (64-bit)
>> 
>> locale:
>> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>> 
>> attached base packages:
>> [1] stats graphics  grDevices utils datasets  methods   base
>> 
>> 
>> Is there any other specific information that would help?
>> 
>> Thanks,
>> 
>> John
>> 
>> On Wed, Nov 6, 2013 at 10:12 AM, Brandon Hurr  wrote:
>>> Robert,
>>> 
>>> I never could reproduce what Brian, John or Ranier were seeing with my
>>> install (downloaded from http://r.research.att.com/ .
>>> 
>>> Perhaps they could chime back in and give you more details.
>>> 
>>> I'm now running Mavericks and still cannot replicate.
>>> R version 3.0.2 (2013-09-25)
>>> Platform: x86_64-apple-darwin10.8.0 (64-bit)
>>> 
>>> locale:
>>> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>>> 
>>> attached base packages:
>>> [1] stats graphics  grDevices utils datasets  methods   base
>>> 
>>> Brandon
>>> 
>>> 
>>> On Wed, Nov 6, 2013 at 12:13 AM, Robert J Goedman wrote:
>>> 
 Brandon,
 
 Do you still see this problem?
 
 Are you using Simon's build?
 
 Regards,
 Rob J. Goedman
 [email protected]
 
 
 On Jan 2, 2013, at 3:28 AM, Prof Brian Ripley 
 wrote:
 
 On 01/01/2013 17:48, Robert J Goedman wrote:
 
 Thanks for taking a look. I'll dig a bit further after getting back home
 tomorrow. It only happens through 'Apple-,' and is then not limited to
 just the Startup preferences (contrary to what I thought earlier).
 
 
 There is a bug report, PR#15017, related to this that we also have not
 been able to reproduce.
 
 
 
 Rob J. Goedman
 [email protected] 
 
 
 
 
 On Jan 1, 2013, at 10:01 AM, Prof Brian Ripley >>> > wrote:
 
 Sorry, cannot reproduce (with Simon's build or mine, on Lion).
 
 Brian
 
 On 31/12/2012 19:37, Robert J Goedman wrote:
 
 Simon & Brian,
 
 Surely this is not high on your minds today, but I did notice an
 issue with R.app.
 
 Using below versions of R-3.0 and the Lion64 version of R.app I
 noticed that by immediately invoking the Startup preferences. e.g. by
 Command/Apple-, R.app will segfault:
 
 *** caught segfault ***
 address 0x10121d000, cause 'memory not mapped'
 ...
 
 Above route seems to always create the crash. I've seen a few other
 occurrences, always with the Startup preferences screen not being
 mapped, but less reproducible. Sa

Re: [R-SIG-Mac] R crashes on preferences screen

2013-11-07 Thread Rainer M Krug 
I have to confirm both, the crash and the flashing of the colour wheel.


> sessionInfo()
R version 3.0.2 (2013-09-25)
Platform: x86_64-apple-darwin10.8.0 (64-bit)

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] stats graphics  grDevices utils datasets  methods   base
> version
   _
platform   x86_64-apple-darwin10.8.0
arch   x86_64
os darwin10.8.0
system x86_64, darwin10.8.0
status
major  3
minor  0.2
year   2013
month  09
day25
svn rev63987
language   R
version.string R version 3.0.2 (2013-09-25)
nickname   Frisbee Sailing
>

Cheers,

Rainer



On 11/07/13, 02:17 , John Magnotti wrote:
> I removed my current R.app and installed the one at:
> http://r.research.att.com/#GUI
> R-3.0-branch-snowleopard-signed.pkg
> 
> but I still get an immediate crash when I 1) open the preferences
> window and 2) click any of the icons in the main "Show All" screen
> (but not the tabs)
> 
> I also noticed that switching away from either the Color or the Syntax
> tab briefly flashes (open then close) the color wheel selection dialog
> 
>> sessionInfo()
> R version 3.0.2 Patched (2013-11-04 r64155)
> Platform: x86_64-apple-darwin10.8.0 (64-bit)
> 
> locale:
> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
> 
> attached base packages:
> [1] stats graphics  grDevices utils datasets  methods   base
> 
> 
> Is there any other specific information that would help?
> 
> Thanks,
> 
> John
> 
> On Wed, Nov 6, 2013 at 10:12 AM, Brandon Hurr  wrote:
>> Robert,
>>
>> I never could reproduce what Brian, John or Ranier were seeing with my
>> install (downloaded from http://r.research.att.com/ .
>>
>> Perhaps they could chime back in and give you more details.
>>
>> I'm now running Mavericks and still cannot replicate.
>> R version 3.0.2 (2013-09-25)
>> Platform: x86_64-apple-darwin10.8.0 (64-bit)
>>
>> locale:
>> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>>
>> attached base packages:
>> [1] stats graphics  grDevices utils datasets  methods   base
>>
>> Brandon
>>
>>
>> On Wed, Nov 6, 2013 at 12:13 AM, Robert J Goedman wrote:
>>
>>> Brandon,
>>>
>>> Do you still see this problem?
>>>
>>> Are you using Simon's build?
>>>
>>> Regards,
>>>  Rob J. Goedman
>>> [email protected]
>>>
>>>
>>> On Jan 2, 2013, at 3:28 AM, Prof Brian Ripley 
>>> wrote:
>>>
>>> On 01/01/2013 17:48, Robert J Goedman wrote:
>>>
>>> Thanks for taking a look. I'll dig a bit further after getting back home
>>> tomorrow. It only happens through 'Apple-,' and is then not limited to
>>> just the Startup preferences (contrary to what I thought earlier).
>>>
>>>
>>> There is a bug report, PR#15017, related to this that we also have not
>>> been able to reproduce.
>>>
>>>
>>>
>>> Rob J. Goedman
>>> [email protected] 
>>>
>>>
>>>
>>>
>>> On Jan 1, 2013, at 10:01 AM, Prof Brian Ripley >> > wrote:
>>>
>>> Sorry, cannot reproduce (with Simon's build or mine, on Lion).
>>>
>>> Brian
>>>
>>> On 31/12/2012 19:37, Robert J Goedman wrote:
>>>
>>> Simon & Brian,
>>>
>>> Surely this is not high on your minds today, but I did notice an
>>> issue with R.app.
>>>
>>> Using below versions of R-3.0 and the Lion64 version of R.app I
>>> noticed that by immediately invoking the Startup preferences. e.g. by
>>> Command/Apple-, R.app will segfault:
>>>
>>> *** caught segfault ***
>>> address 0x10121d000, cause 'memory not mapped'
>>> ...
>>>
>>> Above route seems to always create the crash. I've seen a few other
>>> occurrences, always with the Startup preferences screen not being
>>> mapped, but less reproducible. Same behavior in Simon's build as in
>>> my own build of R.app.
>>>
>>> A reasonable work around is to get there through the Set Colors icon.
>>> I'm on OSX8.3 preview 3 and using Xcode 4.6 dp4. And using the CRAN
>>> version of R, did not yet build R myself as outlined in the Install file.
>>>
>>> Happy New Year, regards,
>>> Rob J. Goedman
>>> [email protected] 
>>>
>>>
>>>  my own build
>>>
>>> R Under development (unstable) (2012-12-30 r61489) -- "Unsuffered
>>> Consequences"
>>> Copyright (C) 2012 The R Foundation for Statistical Computing
>>> ISBN 3-900051-07-0
>>> Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
>>>
>>> R is free software and comes with ABSOLUTELY NO WARRANTY.
>>> You are welcome to redistribute it under certain conditions.
>>> Type 'license()' or 'licence()' for distribution details.
>>>
>>>  Natural language support but running in an English locale
>>>
>>> R is a collaborative project with many contributors.
>>> Type 'contributors()' for more information and
>>> 'citation()' on how to cite R or R packages in publications.
>>>
>>> Type 'demo()' for some demos, 'help()' for on-line help, or
>>> 'help.start()'

Re: [R-SIG-Mac] R crashes on preferences screen

2013-11-07 Thread Brandon Hurr 
John,

I also see the color wheel pop up briefly on my machine when moving from
either "Console" or "Syntax" to another preference header. Seems like a
very minor inconvenience compared to the crashing you observe though.

Brandon


On Thu, Nov 7, 2013 at 1:17 AM, John Magnotti wrote:

> I removed my current R.app and installed the one at:
> http://r.research.att.com/#GUI
> R-3.0-branch-snowleopard-signed.pkg
>
> but I still get an immediate crash when I 1) open the preferences
> window and 2) click any of the icons in the main "Show All" screen
> (but not the tabs)
>
> I also noticed that switching away from either the Color or the Syntax
> tab briefly flashes (open then close) the color wheel selection dialog
>
> > sessionInfo()
> R version 3.0.2 Patched (2013-11-04 r64155)
> Platform: x86_64-apple-darwin10.8.0 (64-bit)
>
> locale:
> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>
> attached base packages:
> [1] stats graphics  grDevices utils datasets  methods   base
>
>
> Is there any other specific information that would help?
>
> Thanks,
>
> John
>
> On Wed, Nov 6, 2013 at 10:12 AM, Brandon Hurr  wrote:
> > Robert,
> >
> > I never could reproduce what Brian, John or Ranier were seeing with my
> > install (downloaded from http://r.research.att.com/ .
> >
> > Perhaps they could chime back in and give you more details.
> >
> > I'm now running Mavericks and still cannot replicate.
> > R version 3.0.2 (2013-09-25)
> > Platform: x86_64-apple-darwin10.8.0 (64-bit)
> >
> > locale:
> > [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
> >
> > attached base packages:
> > [1] stats graphics  grDevices utils datasets  methods   base
> >
> > Brandon
> >
> >
> > On Wed, Nov 6, 2013 at 12:13 AM, Robert J Goedman  >wrote:
> >
> >> Brandon,
> >>
> >> Do you still see this problem?
> >>
> >> Are you using Simon's build?
> >>
> >> Regards,
> >>  Rob J. Goedman
> >> [email protected]
> >>
> >>
> >> On Jan 2, 2013, at 3:28 AM, Prof Brian Ripley 
> >> wrote:
> >>
> >> On 01/01/2013 17:48, Robert J Goedman wrote:
> >>
> >> Thanks for taking a look. I'll dig a bit further after getting back home
> >> tomorrow. It only happens through 'Apple-,' and is then not limited to
> >> just the Startup preferences (contrary to what I thought earlier).
> >>
> >>
> >> There is a bug report, PR#15017, related to this that we also have not
> >> been able to reproduce.
> >>
> >>
> >>
> >> Rob J. Goedman
> >> [email protected] 
> >>
> >>
> >>
> >>
> >> On Jan 1, 2013, at 10:01 AM, Prof Brian Ripley  >> > wrote:
> >>
> >> Sorry, cannot reproduce (with Simon's build or mine, on Lion).
> >>
> >> Brian
> >>
> >> On 31/12/2012 19:37, Robert J Goedman wrote:
> >>
> >> Simon & Brian,
> >>
> >> Surely this is not high on your minds today, but I did notice an
> >> issue with R.app.
> >>
> >> Using below versions of R-3.0 and the Lion64 version of R.app I
> >> noticed that by immediately invoking the Startup preferences. e.g. by
> >> Command/Apple-, R.app will segfault:
> >>
> >> *** caught segfault ***
> >> address 0x10121d000, cause 'memory not mapped'
> >> ...
> >>
> >> Above route seems to always create the crash. I've seen a few other
> >> occurrences, always with the Startup preferences screen not being
> >> mapped, but less reproducible. Same behavior in Simon's build as in
> >> my own build of R.app.
> >>
> >> A reasonable work around is to get there through the Set Colors icon.
> >> I'm on OSX8.3 preview 3 and using Xcode 4.6 dp4. And using the CRAN
> >> version of R, did not yet build R myself as outlined in the Install
> file.
> >>
> >> Happy New Year, regards,
> >> Rob J. Goedman
> >> [email protected] 
> >>
> >>
> >>  my own build
> >>
> >> R Under development (unstable) (2012-12-30 r61489) -- "Unsuffered
> >> Consequences"
> >> Copyright (C) 2012 The R Foundation for Statistical Computing
> >> ISBN 3-900051-07-0
> >> Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
> >>
> >> R is free software and comes with ABSOLUTELY NO WARRANTY.
> >> You are welcome to redistribute it under certain conditions.
> >> Type 'license()' or 'licence()' for distribution details.
> >>
> >>  Natural language support but running in an English locale
> >>
> >> R is a collaborative project with many contributors.
> >> Type 'contributors()' for more information and
> >> 'citation()' on how to cite R or R packages in publications.
> >>
> >> Type 'demo()' for some demos, 'help()' for on-line help, or
> >> 'help.start()' for an HTML browser interface to help.
> >> Type 'q()' to quit R.
> >>
> >> [R.app GUI 1.53 (6418) x86_64-apple-darwin9.8.0]
> >>
> >> [Workspace restored from /Users/rob/Projects/.RData]
> >> [History restored from /Users/rob/Projects/.Rapp.history]
> >>
> >> sessionInfo()
> >>
> >> R Under development (unstable) (2012-12-30 r61489)
> >> Platform: x86_64-apple-darwin9

Re: [R-SIG-Mac] R crashes on preferences screen

2013-11-06 Thread John Magnotti 
I removed my current R.app and installed the one at:
http://r.research.att.com/#GUI
R-3.0-branch-snowleopard-signed.pkg

but I still get an immediate crash when I 1) open the preferences
window and 2) click any of the icons in the main "Show All" screen
(but not the tabs)

I also noticed that switching away from either the Color or the Syntax
tab briefly flashes (open then close) the color wheel selection dialog

> sessionInfo()
R version 3.0.2 Patched (2013-11-04 r64155)
Platform: x86_64-apple-darwin10.8.0 (64-bit)

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] stats graphics  grDevices utils datasets  methods   base


Is there any other specific information that would help?

Thanks,

John

On Wed, Nov 6, 2013 at 10:12 AM, Brandon Hurr  wrote:
> Robert,
>
> I never could reproduce what Brian, John or Ranier were seeing with my
> install (downloaded from http://r.research.att.com/ .
>
> Perhaps they could chime back in and give you more details.
>
> I'm now running Mavericks and still cannot replicate.
> R version 3.0.2 (2013-09-25)
> Platform: x86_64-apple-darwin10.8.0 (64-bit)
>
> locale:
> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>
> attached base packages:
> [1] stats graphics  grDevices utils datasets  methods   base
>
> Brandon
>
>
> On Wed, Nov 6, 2013 at 12:13 AM, Robert J Goedman wrote:
>
>> Brandon,
>>
>> Do you still see this problem?
>>
>> Are you using Simon's build?
>>
>> Regards,
>>  Rob J. Goedman
>> [email protected]
>>
>>
>> On Jan 2, 2013, at 3:28 AM, Prof Brian Ripley 
>> wrote:
>>
>> On 01/01/2013 17:48, Robert J Goedman wrote:
>>
>> Thanks for taking a look. I'll dig a bit further after getting back home
>> tomorrow. It only happens through 'Apple-,' and is then not limited to
>> just the Startup preferences (contrary to what I thought earlier).
>>
>>
>> There is a bug report, PR#15017, related to this that we also have not
>> been able to reproduce.
>>
>>
>>
>> Rob J. Goedman
>> [email protected] 
>>
>>
>>
>>
>> On Jan 1, 2013, at 10:01 AM, Prof Brian Ripley > > wrote:
>>
>> Sorry, cannot reproduce (with Simon's build or mine, on Lion).
>>
>> Brian
>>
>> On 31/12/2012 19:37, Robert J Goedman wrote:
>>
>> Simon & Brian,
>>
>> Surely this is not high on your minds today, but I did notice an
>> issue with R.app.
>>
>> Using below versions of R-3.0 and the Lion64 version of R.app I
>> noticed that by immediately invoking the Startup preferences. e.g. by
>> Command/Apple-, R.app will segfault:
>>
>> *** caught segfault ***
>> address 0x10121d000, cause 'memory not mapped'
>> ...
>>
>> Above route seems to always create the crash. I've seen a few other
>> occurrences, always with the Startup preferences screen not being
>> mapped, but less reproducible. Same behavior in Simon's build as in
>> my own build of R.app.
>>
>> A reasonable work around is to get there through the Set Colors icon.
>> I'm on OSX8.3 preview 3 and using Xcode 4.6 dp4. And using the CRAN
>> version of R, did not yet build R myself as outlined in the Install file.
>>
>> Happy New Year, regards,
>> Rob J. Goedman
>> [email protected] 
>>
>>
>>  my own build
>>
>> R Under development (unstable) (2012-12-30 r61489) -- "Unsuffered
>> Consequences"
>> Copyright (C) 2012 The R Foundation for Statistical Computing
>> ISBN 3-900051-07-0
>> Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
>>
>> R is free software and comes with ABSOLUTELY NO WARRANTY.
>> You are welcome to redistribute it under certain conditions.
>> Type 'license()' or 'licence()' for distribution details.
>>
>>  Natural language support but running in an English locale
>>
>> R is a collaborative project with many contributors.
>> Type 'contributors()' for more information and
>> 'citation()' on how to cite R or R packages in publications.
>>
>> Type 'demo()' for some demos, 'help()' for on-line help, or
>> 'help.start()' for an HTML browser interface to help.
>> Type 'q()' to quit R.
>>
>> [R.app GUI 1.53 (6418) x86_64-apple-darwin9.8.0]
>>
>> [Workspace restored from /Users/rob/Projects/.RData]
>> [History restored from /Users/rob/Projects/.Rapp.history]
>>
>> sessionInfo()
>>
>> R Under development (unstable) (2012-12-30 r61489)
>> Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
>>
>>
>> locale:
>> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>>
>> attached base packages:
>> [1] stats graphics  grDevices utils datasets  methods   base
>>
>>
>> -R.app from
>> Simon-
>>
>> R Under development (unstable) (2012-12-30 r61489) -- "Unsuffered
>> Consequences"
>> Copyright (C) 2012 The R Foundation for Statistical Computing
>> ISBN 3-900051-07-0
>> Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
>>
>> R is free software and comes with ABSOLUTELY NO W

Re: [R-SIG-Mac] R crashes on preferences screen

2013-11-06 Thread Robert J Goedman 
Hi Brandon,

Thanks for the update. I guess if it now works well for you, it must be 
something on my system or how I build R.app.

Anyway, I have temporarily disabled the section of the code that seems to cause 
the crash and that works on my system, so we'll just give it some time.

Rob J. Goedman
[email protected]




On Nov 6, 2013, at 10:12 AM, Brandon Hurr  wrote:

> Robert, 
> 
> I never could reproduce what Brian, John or Ranier were seeing with my 
> install (downloaded from http://r.research.att.com/ . 
> 
> Perhaps they could chime back in and give you more details. 
> 
> I'm now running Mavericks and still cannot replicate. 
> R version 3.0.2 (2013-09-25)
> Platform: x86_64-apple-darwin10.8.0 (64-bit)
> 
> locale:
> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
> 
> attached base packages:
> [1] stats graphics  grDevices utils datasets  methods   base
> 
> Brandon
> 
> 
> On Wed, Nov 6, 2013 at 12:13 AM, Robert J Goedman  wrote:
> Brandon,
> 
> Do you still see this problem?
> 
> Are you using Simon's build?
> 
> Regards,
> Rob J. Goedman
> [email protected]
> 
> 
> On Jan 2, 2013, at 3:28 AM, Prof Brian Ripley  wrote:
> 
>> On 01/01/2013 17:48, Robert J Goedman wrote:
>>> Thanks for taking a look. I'll dig a bit further after getting back home
>>> tomorrow. It only happens through 'Apple-,' and is then not limited to
>>> just the Startup preferences (contrary to what I thought earlier).
>> 
>> There is a bug report, PR#15017, related to this that we also have not been 
>> able to reproduce.
>> 
>> 
>>> 
>>> Rob J. Goedman
>>> [email protected] 
>>> 
>>> 
>>> 
>>> 
>>> On Jan 1, 2013, at 10:01 AM, Prof Brian Ripley >> > wrote:
>>> 
 Sorry, cannot reproduce (with Simon's build or mine, on Lion).
 
 Brian
 
 On 31/12/2012 19:37, Robert J Goedman wrote:
> Simon & Brian,
> 
> Surely this is not high on your minds today, but I did notice an
> issue with R.app.
> 
> Using below versions of R-3.0 and the Lion64 version of R.app I
> noticed that by immediately invoking the Startup preferences. e.g. by
> Command/Apple-, R.app will segfault:
> 
> *** caught segfault ***
> address 0x10121d000, cause 'memory not mapped'
> ...
> 
> Above route seems to always create the crash. I've seen a few other
> occurrences, always with the Startup preferences screen not being
> mapped, but less reproducible. Same behavior in Simon's build as in
> my own build of R.app.
> 
> A reasonable work around is to get there through the Set Colors icon.
> I'm on OSX8.3 preview 3 and using Xcode 4.6 dp4. And using the CRAN
> version of R, did not yet build R myself as outlined in the Install file.
> 
> Happy New Year, regards,
> Rob J. Goedman
> [email protected] 
> 
> 
>  my own build
> 
> R Under development (unstable) (2012-12-30 r61489) -- "Unsuffered
> Consequences"
> Copyright (C) 2012 The R Foundation for Statistical Computing
> ISBN 3-900051-07-0
> Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
> 
> R is free software and comes with ABSOLUTELY NO WARRANTY.
> You are welcome to redistribute it under certain conditions.
> Type 'license()' or 'licence()' for distribution details.
> 
>  Natural language support but running in an English locale
> 
> R is a collaborative project with many contributors.
> Type 'contributors()' for more information and
> 'citation()' on how to cite R or R packages in publications.
> 
> Type 'demo()' for some demos, 'help()' for on-line help, or
> 'help.start()' for an HTML browser interface to help.
> Type 'q()' to quit R.
> 
> [R.app GUI 1.53 (6418) x86_64-apple-darwin9.8.0]
> 
> [Workspace restored from /Users/rob/Projects/.RData]
> [History restored from /Users/rob/Projects/.Rapp.history]
> 
>> sessionInfo()
> R Under development (unstable) (2012-12-30 r61489)
> Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
> 
> 
> locale:
> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
> 
> attached base packages:
> [1] stats graphics  grDevices utils datasets  methods   base
> 
> 
> -R.app from
> Simon-
> 
> R Under development (unstable) (2012-12-30 r61489) -- "Unsuffered
> Consequences"
> Copyright (C) 2012 The R Foundation for Statistical Computing
> ISBN 3-900051-07-0
> Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
> 
> R is free software and comes with ABSOLUTELY NO WARRANTY.
> You are welcome to redistribute it under certain conditions.
> Type 'license()' or 'licence()' for distribution details.
> 
>  Natural language s

Re: [R-SIG-Mac] R crashes on preferences screen

2013-11-06 Thread Brandon Hurr 
Robert,

I never could reproduce what Brian, John or Ranier were seeing with my
install (downloaded from http://r.research.att.com/ .

Perhaps they could chime back in and give you more details.

I'm now running Mavericks and still cannot replicate.
R version 3.0.2 (2013-09-25)
Platform: x86_64-apple-darwin10.8.0 (64-bit)

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] stats graphics  grDevices utils datasets  methods   base

Brandon


On Wed, Nov 6, 2013 at 12:13 AM, Robert J Goedman wrote:

> Brandon,
>
> Do you still see this problem?
>
> Are you using Simon's build?
>
> Regards,
>  Rob J. Goedman
> [email protected]
>
>
> On Jan 2, 2013, at 3:28 AM, Prof Brian Ripley 
> wrote:
>
> On 01/01/2013 17:48, Robert J Goedman wrote:
>
> Thanks for taking a look. I'll dig a bit further after getting back home
> tomorrow. It only happens through 'Apple-,' and is then not limited to
> just the Startup preferences (contrary to what I thought earlier).
>
>
> There is a bug report, PR#15017, related to this that we also have not
> been able to reproduce.
>
>
>
> Rob J. Goedman
> [email protected] 
>
>
>
>
> On Jan 1, 2013, at 10:01 AM, Prof Brian Ripley  > wrote:
>
> Sorry, cannot reproduce (with Simon's build or mine, on Lion).
>
> Brian
>
> On 31/12/2012 19:37, Robert J Goedman wrote:
>
> Simon & Brian,
>
> Surely this is not high on your minds today, but I did notice an
> issue with R.app.
>
> Using below versions of R-3.0 and the Lion64 version of R.app I
> noticed that by immediately invoking the Startup preferences. e.g. by
> Command/Apple-, R.app will segfault:
>
> *** caught segfault ***
> address 0x10121d000, cause 'memory not mapped'
> ...
>
> Above route seems to always create the crash. I've seen a few other
> occurrences, always with the Startup preferences screen not being
> mapped, but less reproducible. Same behavior in Simon's build as in
> my own build of R.app.
>
> A reasonable work around is to get there through the Set Colors icon.
> I'm on OSX8.3 preview 3 and using Xcode 4.6 dp4. And using the CRAN
> version of R, did not yet build R myself as outlined in the Install file.
>
> Happy New Year, regards,
> Rob J. Goedman
> [email protected] 
>
>
>  my own build
>
> R Under development (unstable) (2012-12-30 r61489) -- "Unsuffered
> Consequences"
> Copyright (C) 2012 The R Foundation for Statistical Computing
> ISBN 3-900051-07-0
> Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
>
> R is free software and comes with ABSOLUTELY NO WARRANTY.
> You are welcome to redistribute it under certain conditions.
> Type 'license()' or 'licence()' for distribution details.
>
>  Natural language support but running in an English locale
>
> R is a collaborative project with many contributors.
> Type 'contributors()' for more information and
> 'citation()' on how to cite R or R packages in publications.
>
> Type 'demo()' for some demos, 'help()' for on-line help, or
> 'help.start()' for an HTML browser interface to help.
> Type 'q()' to quit R.
>
> [R.app GUI 1.53 (6418) x86_64-apple-darwin9.8.0]
>
> [Workspace restored from /Users/rob/Projects/.RData]
> [History restored from /Users/rob/Projects/.Rapp.history]
>
> sessionInfo()
>
> R Under development (unstable) (2012-12-30 r61489)
> Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
>
>
> locale:
> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>
> attached base packages:
> [1] stats graphics  grDevices utils datasets  methods   base
>
>
> -R.app from
> Simon-
>
> R Under development (unstable) (2012-12-30 r61489) -- "Unsuffered
> Consequences"
> Copyright (C) 2012 The R Foundation for Statistical Computing
> ISBN 3-900051-07-0
> Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
>
> R is free software and comes with ABSOLUTELY NO WARRANTY.
> You are welcome to redistribute it under certain conditions.
> Type 'license()' or 'licence()' for distribution details.
>
>  Natural language support but running in an English locale
>
> R is a collaborative project with many contributors.
> Type 'contributors()' for more information and
> 'citation()' on how to cite R or R packages in publications.
>
> Type 'demo()' for some demos, 'help()' for on-line help, or
> 'help.start()' for an HTML browser interface to help.
> Type 'q()' to quit R.
>
> [R.app GUI 1.53 (6418) x86_64-apple-darwin9.8.0]
>
> [Workspace restored from /Users/rob/Projects/.RData]
> [History restored from /Users/rob/Projects/.Rapp.history]
>
> sessionInfo()
>
> R Under development (unstable) (2012-12-30 r61489)
> Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
>
>
> locale:
> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>
> attached base packages:
> [1] stats graphics  grDevices utils datasets  met

Re: [R-SIG-Mac] R crashes on preferences screen

2013-11-05 Thread Robert J Goedman 
Brandon,

Do you still see this problem?

Are you using Simon's build?

Regards,
Rob J. Goedman
[email protected]


On Jan 2, 2013, at 3:28 AM, Prof Brian Ripley  wrote:

> On 01/01/2013 17:48, Robert J Goedman wrote:
>> Thanks for taking a look. I'll dig a bit further after getting back home
>> tomorrow. It only happens through 'Apple-,' and is then not limited to
>> just the Startup preferences (contrary to what I thought earlier).
> 
> There is a bug report, PR#15017, related to this that we also have not been 
> able to reproduce.
> 
> 
>> 
>> Rob J. Goedman
>> [email protected] 
>> 
>> 
>> 
>> 
>> On Jan 1, 2013, at 10:01 AM, Prof Brian Ripley > > wrote:
>> 
>>> Sorry, cannot reproduce (with Simon's build or mine, on Lion).
>>> 
>>> Brian
>>> 
>>> On 31/12/2012 19:37, Robert J Goedman wrote:
 Simon & Brian,
 
 Surely this is not high on your minds today, but I did notice an
 issue with R.app.
 
 Using below versions of R-3.0 and the Lion64 version of R.app I
 noticed that by immediately invoking the Startup preferences. e.g. by
 Command/Apple-, R.app will segfault:
 
 *** caught segfault ***
 address 0x10121d000, cause 'memory not mapped'
 ...
 
 Above route seems to always create the crash. I've seen a few other
 occurrences, always with the Startup preferences screen not being
 mapped, but less reproducible. Same behavior in Simon's build as in
 my own build of R.app.
 
 A reasonable work around is to get there through the Set Colors icon.
 I'm on OSX8.3 preview 3 and using Xcode 4.6 dp4. And using the CRAN
 version of R, did not yet build R myself as outlined in the Install file.
 
 Happy New Year, regards,
 Rob J. Goedman
 [email protected] 
 
 
  my own build
 
 R Under development (unstable) (2012-12-30 r61489) -- "Unsuffered
 Consequences"
 Copyright (C) 2012 The R Foundation for Statistical Computing
 ISBN 3-900051-07-0
 Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
 
 R is free software and comes with ABSOLUTELY NO WARRANTY.
 You are welcome to redistribute it under certain conditions.
 Type 'license()' or 'licence()' for distribution details.
 
  Natural language support but running in an English locale
 
 R is a collaborative project with many contributors.
 Type 'contributors()' for more information and
 'citation()' on how to cite R or R packages in publications.
 
 Type 'demo()' for some demos, 'help()' for on-line help, or
 'help.start()' for an HTML browser interface to help.
 Type 'q()' to quit R.
 
 [R.app GUI 1.53 (6418) x86_64-apple-darwin9.8.0]
 
 [Workspace restored from /Users/rob/Projects/.RData]
 [History restored from /Users/rob/Projects/.Rapp.history]
 
> sessionInfo()
 R Under development (unstable) (2012-12-30 r61489)
 Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
 
 locale:
 [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
 
 attached base packages:
 [1] stats graphics  grDevices utils datasets  methods   base
 
 
 -R.app from
 Simon-
 
 R Under development (unstable) (2012-12-30 r61489) -- "Unsuffered
 Consequences"
 Copyright (C) 2012 The R Foundation for Statistical Computing
 ISBN 3-900051-07-0
 Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
 
 R is free software and comes with ABSOLUTELY NO WARRANTY.
 You are welcome to redistribute it under certain conditions.
 Type 'license()' or 'licence()' for distribution details.
 
  Natural language support but running in an English locale
 
 R is a collaborative project with many contributors.
 Type 'contributors()' for more information and
 'citation()' on how to cite R or R packages in publications.
 
 Type 'demo()' for some demos, 'help()' for on-line help, or
 'help.start()' for an HTML browser interface to help.
 Type 'q()' to quit R.
 
 [R.app GUI 1.53 (6418) x86_64-apple-darwin9.8.0]
 
 [Workspace restored from /Users/rob/Projects/.RData]
 [History restored from /Users/rob/Projects/.Rapp.history]
 
> sessionInfo()
 R Under development (unstable) (2012-12-30 r61489)
 Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
 
 locale:
 [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
 
 attached base packages:
 [1] stats graphics  grDevices utils datasets  methods   base
 
>>> 
>>> 
>>> --
>>> Brian D. Ripley, [email protected] 
>>> Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/
>>> University of Oxford, Tel:  +44

Re: [R-SIG-Mac] R crashes on preferences screen

2013-10-03 Thread Rainer M Krug 
John Magnotti  writes:

> Going to the preferences screen in R.app (Command + , or
> R->preferences) and selecting any of the icons causes R to crash with
> a segfault. If I click any the tabs at the top of the preferences
> window R doesn't crash, but if I go back to the  "show all" tab and
> choose an option it causes an immediate failure.
>
> I'm running OS X 10.8.5, sessionInfo pasted below

I can confirm this, but only when selecting the icons in the 
"Show All" section. Selecting the top ones, it works.

Cheers,

Rainer


,
| > sessionInfo()
| R version 3.0.1 (2013-05-16)
| Platform: x86_64-apple-darwin10.8.0 (64-bit)
| 
| locale:
| [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
| 
| attached base packages:
| [1] stats graphics  grDevices utils datasets  methods   base 
| > version
|_   
| platform   x86_64-apple-darwin10.8.0   
| arch   x86_64  
| os darwin10.8.0
| system x86_64, darwin10.8.0
| status 
| major  3   
| minor  0.1 
| year   2013
| month  05  
| day16  
| svn rev62743   
| language   R   
| version.string R version 3.0.1 (2013-05-16)
| nickname   Good Sport  
`


> 
>
> Thoughts?
>
> John
>
>
>> sessionInfo()
> R version 3.0.2 (2013-09-25)
> Platform: x86_64-apple-darwin10.8.0 (64-bit)
>
> locale:
> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>
> attached base packages:
> [1] stats graphics  grDevices utils datasets  methods   base
<#secure method=pgpmime mode=sign>

-- 
Rainer M. Krug

email: RMKruggmailcom

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Re: [R-SIG-Mac] R crashes on preferences screen

2013-10-02 Thread Brandon Hurr 
I cannot reproduce on my mac mini (2011). OS X 10.8.5.

R version 3.0.2 (2013-09-25)
Platform: x86_64-apple-darwin10.8.0 (64-bit)

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] stats graphics  grDevices utils datasets  methods   base


On Wed, Oct 2, 2013 at 2:03 PM, John Magnotti wrote:

> Going to the preferences screen in R.app (Command + , or
> R->preferences) and selecting any of the icons causes R to crash with
> a segfault. If I click any the tabs at the top of the preferences
> window R doesn't crash, but if I go back to the  "show all" tab and
> choose an option it causes an immediate failure.
>
> I'm running OS X 10.8.5, sessionInfo pasted below
>
> Thoughts?
>
> John
>
>
> > sessionInfo()
> R version 3.0.2 (2013-09-25)
> Platform: x86_64-apple-darwin10.8.0 (64-bit)
>
> locale:
> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>
> attached base packages:
> [1] stats graphics  grDevices utils datasets  methods   base
>
> ___
> R-SIG-Mac mailing list
> [email protected]
> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
>

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