[R-sig-phylo] Call for Software Bazaar entries open for Conference on Informatics for Phylogenetics, Evolution, and Biodiversity (iEvoBio)

The Call for Software Bazaar entries is now open for the 2012 conference on Informatics for Phylogenetics, Evolution, and Biodiversity (iEvoBio), at http://ievobio.org/ocs2/index.php/ievobio/2012. See below for instructions. The Software Bazaar features presenters demonstrating their software

[R-sig-phylo] problems with assign(), paste(), and data.frame() for folders containing trees

Hi folks, I am trying to recurse through several numbered subfolders in a directory. Each folder has many trees that I want to display summary values for. I have been expanding data frames using code with the structure name - rbind(name, newvals) to produce a data frame with n rows equal to

Re: [R-sig-phylo] problems with assign(), paste(), and data.frame() for folders containing trees

Hi John, You seem to transform a (relatively) simple problem into a complicated one. First, you can get all the tree file names in one command, such as (I moved to a directory with one subdir with trees estimated by ML and another one by NJ; this is slightly arranged): f - grep(\\.tre,