Re: [R-sig-phylo] Add species branches to genus level tree

2012-10-02 Thread David Bapst
Thomas- I think your interests might be served by my function expandTaxonTree in my library paleotree on CRAN. Given a genus-level tree with data on the species within each genus, it will turn each genus into an unresolved polytomy of the congeneric species. -Dave On Tue, Oct 2, 2012 at 3:08 AM, D

[R-sig-phylo] Add species branches to genus level tree

2012-10-02 Thread Davies, Thomas
Dear All Sorry to mass email with what could be a very basic question. I am trying to generate a tree for 1000 plus species. To reduce the search effort I first generated a tree to genus level from NCBI Itol with the intention of adding species branches to each genus after. Doing this manual