Hello,
thank You very much for Your reply. I'm still little confused.
Dne Pá 7. června 2013 16:03:13 jste napsal(a):
Hello there,
you could have done the PCoA on Chord's distance using adegenet, it would
have probably been simpler (see the vignette adegenet-basics, section 6
Multivariate
Hello,
dist.genpop is a re-implementation of dist.genet - all material for genetics in
ade4 should be deprecated by now, as it has been transfered into adegenet or
adephylo a few years ago already.
I do not know about a package implementing Goldstein's distance.
As for your question, you
Hello
Dne Po 10. června 2013 14:26:41 jste napsal(a):
Hello,
dist.genpop is a re-implementation of dist.genet - all material for genetics
in ade4 should be deprecated by now, as it has been transfered into
adegenet or adephylo a few years ago already.
OK, I see. So can I use dist.genpop()
Hi,
I am trying to use the collies.test and maxlik.betasplit tests in apTreeshape R
package.
I have a set of DNA sequence in fasta format. I am following the steps below.
1. I construct a NJ using the ape R package using the nj(dist.dna(dataset).
2. After I use the as.treeshape form the
Dear Fabricia,
I am the maintainer of the package.
Can you send me the tree that is responsible for the warnings please. It
might be because of unresolved nodes.
Sincerely
Michael Blum
Le 10/06/13 17:53, Fabricia Nascimento a écrit :
Hi,
I am trying to use the collies.test and
