[R-sig-phylo] NNI/SPR Distance

2015-06-22 Thread Karla Shikev
Dear colleagues, Does anyone know of a function to calculate the NNI/SPR distance between two trees? Thanks a lot! Karla Shikev [[alternative HTML version deleted]] ___ R-sig-phylo mailing list - R-sig-phylo@r-project.org https://stat.ethz.ch

Re: [R-sig-phylo] Margin Artifact in plot.phylo with Very Long Tip Labels, despite show.tip.label=FALSE

2015-06-22 Thread Emmanuel Paradis
Hi, David: thanks for the report. Liam: thanks for the fix. I modified it slightly: if (is.character(alp)) { tmp <- max(xx.tips) if (show.tip.label) tmp <- tmp * 1.5 } else { I did the same correction a few lines below in the function for the y-limit with non-horizont