Dear colleagues.
Anyone updating phytools from GitHub
(https://github.com/liamrevell/phytools) -- for instance, using the
remotes or devtools packages -- should be aware that this update will
FAIL unless you first update ape from GitHub.
To update both ape and phytools to their GitHub
I haven't used the dist.dna function before, so apologies if I'm off base,
but I see it returns a distance object. You can simply do
dMat <- as.matrix(d)
And now it's a matrix of the more familiar form. I haven't used the split
function before either, but rows (or columns) can just be extracted
