e's
distance from the median of a representative subset?
- Martin
--
*Dr. Martin R. Smith*
Associate Professor & Director of Education
Department of Earth Sciences
Durham University
Mountjoy Site, South Road, Durham, DH1 3LE United Kingdom
*T:* +44 (0)191 334 2320 (Tues / Thurs)
*M*: +44 (0)
noted there, the RF distance has certain issues which means that it is
not always the most suitable measure of tree dissimilarity!)
And you can find ape's GitHub repo https://github.com/emmanuelparadis/ape
Martin
--
*Dr. Martin R. Smith*
Associate Professor & Director of Education
Depa
elled trees:
https://ms609.github.io/TreeTools/reference/TreeShape.html
I'd be interested to hear if you come across an effective way to enumerate
unrooted tree shapes, which is a less straightforward affair...
Best,
Martin
--
*Dr. Martin R. Smith*
Assistant Professor in Palaeontology
Durha