Re: [R-sig-phylo] Error message using clustal{ape} under Windows

2012-01-03 Thread Klaus Schliep
Dear Gwennaël, it seems it is a problem with the path to clustal, as the path contains spaces. Try clustal(x, exec = shortPathName("C:/Program Files (x86)/ClustalW2/clustalw2.exe")) it works for me. Regards, Klaus On 1/3/12, Gwennaël Bataille wrote: > Dear all, > I really need some help for u

[R-sig-phylo] Error message using clustal{ape} under Windows

2012-01-03 Thread Gwennaël Bataille
Dear all, I really need some help for using the clustal function of the ape package under Windows... I already discussed this with Emmanuel Paradis (in charge of this function), but the data seem to work correctly under his Linux system, and he was unfortunately not able to fix this problem.