Hi Jarrett,
First, there are a lot of tools in the bioinformatics community that can
convert FATSQ files to FASTA far more efficiently than ape does (I think
cutadapt can do that, but surely many others too). But with a small file like
this one, ape can do the job :)
See below for specific
Hello,
I have a FASTQ file from which I would like to extract only the FASTA
sequences (and not the associated PHRED quality scores).
For instance, using the file mentioned in the R documentation for
read.fastq():
library(ape)
a <- "
