Hi John,
I don't have a simple solution for this in R (although I'm sure there is
one), but we will add this as an output option in PartitionFinder in future
releases.
If you have no luck here (the question is a bit off topic for this list),
try posting on Stack Overflow.
Rob
On 4 April 2013
Hi all,
PartitionFinder selected a complex partitioning scheme that I would like to put
into a TreeFinder analysis. As far as I know, TreeFinder ignores NEXUS SETS
blocks, and so I would have to input the partitioning by hand. I do this
normally for repetitive partitions, e.g. codon positions,
