Re: [R-sig-phylo] phytools - evaluating significance of pgls.Ives

, Tony Anthony Ives Department of Zoology 459 Birge Hall (4th floor, E end of bldg) UW-Madison Madison, WI 53706 608-262-1519 On Mar 1, 2015, at 10:53 PM, Simon Blomberg s.blombe...@uq.edu.au wrote: Hi Ben, Yes, you would have to assume constant variance across species to use N=24. I think

Re: [R-sig-phylo] PLogReg.m: error in phylogenetic logistic regression in MATLAB

it is kosher to deal with this here. Incidentally, though, I think Lam Si Tung Ho and Cecile Ane are working on an R version of PLogReg. Cheers, Tony Anthony Ives Department of Zoology 459 Birge Hall (4th floor, E end of bldg) UW-Madison Madison, WI 53706 608-262-1519 website On Aug 26, 2013, at 3

Re: [R-sig-phylo] Phylogenetic correlation in relative abundance data

. Ecological Monographs 81:511-525. The general approach could be used for LMMs rather than GLMMs, although it might take a little custom coding. Cheers, Tony Anthony Ives Department of Zoology 459 Birge Hall (4th floor, E end of bldg) UW-Madison Madison, WI 53706 608-262-1519 website On Jan 24