Re: [R-sig-phylo] Allele frequency estimation using pegas

2011-01-23 Thread Emmanuel Paradis
Dear Ayman, On Sun, 23 Jan 2011 16:10:44 +0200 "Ayman Sabry" wrote: Dear Emmanual Thanks a lot for your help I tried the code u send me and it is nicely working. However, How about if I like to get the analysis for each population separately as well as the pooled population. Again you have

Re: [R-sig-phylo] Allele frequency estimation using pegas

2011-01-23 Thread Ayman Sabry
Gen for centred/scaled >allele frequencies. > > Best > > Thibaut > >From: r-sig-phylo-boun...@r-project.org >[r-sig-phylo-boun...@r-project.org] On Behalf Of Ayman Sabry >[amsa...@gmail.com] > Sent: 20 January 2011 21:58 > To: r-sig-phylo@r-project.org > Sub

Re: [R-sig-phylo] Allele frequency estimation using pegas

2011-01-22 Thread Emmanuel Paradis
_ From: r-sig-phylo-boun...@r-project.org [r-sig-phylo-boun...@r-project.org] On Behalf Of Ayman Sabry [amsa...@gmail.com] Sent: 20 January 2011 21:58 To: r-sig-phylo@r-project.org Subject: [R-sig-phylo] Allele frequency estimation using pegas Dears I am trying to use Pegas to estimate alle

Re: [R-sig-phylo] Allele frequency estimation using pegas

2011-01-21 Thread Jombart, Thibaut
t.org] On Behalf Of Ayman Sabry [amsa...@gmail.com] Sent: 20 January 2011 21:58 To: r-sig-phylo@r-project.org Subject: [R-sig-phylo] Allele frequency estimation using pegas Dears I am trying to use Pegas to estimate allele frequency What I am getting out from "summary" command is just

[R-sig-phylo] Allele frequency estimation using pegas

2011-01-20 Thread Ayman Sabry
Dears I am trying to use Pegas to estimate allele frequency What I am getting out from "summary" command is just count of each allele (so I am getting integers not decimal). Do any one knows a dirt command for allele frequency estimation Ayman [[alternative HTML vers