Shota Nakamura said --
> Following Luke's advise, I edited fan tree by Illustrator.
> I got the image I want.
>
> Please find attached.
> Left image is output of "ape", right one is edited version.
>
> If you have an idea to do this by "ape", tell me please.
This is an illegitimate answer, but
Great ! I got that image by R.
Manys thanks for your kind help !!
Shota
>> Following Luke's advise, I edited fan tree by Illustrator.
>> I got the image I want.
>>
>> Please find attached.
>> Left image is output of "ape", right one is edited version.
>>
>> If you have an idea to do this by "ape"
Shota Nakamura <[EMAIL PROTECTED]> a écrit :
Following Luke's advise, I edited fan tree by Illustrator.
I got the image I want.
Please find attached.
Left image is output of "ape", right one is edited version.
If you have an idea to do this by "ape", tell me please.
Thank you very much for yo
Shota Nakamura <[EMAIL PROTECTED]> a écrit :
Thank you very much for your prompt response.
Actually, I've already tried a radial plot.
The tree I want to make is like radial plot as tournament format.
I hope this reply makes sense.
Not to me. Can you send a picture with this format?
EP
Sor
Another solution to this type of problem is to plot your phylogram to
a large pdf (for Emmanuel's example, at least 60 x 60 inches), and
then edit it in Adobe illustrator.
library(ape)
pdf(file="test.pdf", width=60, height=60)
tr <- rtree(1000)
plot(tr, "f", FALSE)
dev.off()
On Nov 12, 2008
Thank you very much for your prompt response.
Actually, I've already tried a radial plot.
The tree I want to make is like radial plot as tournament format.
I hope this reply makes sense.
Sorry for poor explanation.
Shota
Dear all,
I would like to make a circle plot by the ape package.
I tried
Shota Nakamura <[EMAIL PROTECTED]> a écrit :
Dear all,
I would like to make a circle plot by the ape package.
I tried to make it by the command "plot.phylo(bigtree, use.edge.length =
FALSE, type = fan)".
But big tree make it hard to see.
Indeed, if I do this:
tr <- rtree(1000)
plot(tr, "f"
Dear all,
I would like to make a circle plot by the ape package.
I tried to make it by the command "plot.phylo(bigtree, use.edge.length =
FALSE, type = fan)".
But big tree make it hard to see.
The image I want is like circle plot (topology only) of MEGA4.
And keeping complete circle is needed.
D
