[R-sig-phylo] iterative pruning from alignment and tree

Hi folks, I'm starting to use APE, and am trying to write a script to iteratively prune taxa from an alignment / tree combination and print the reduced datasets to separate files. I was thinking of using some combination of drop.tip + DNAbin, but I am unsure of how to link removing the tip

Re: [R-sig-phylo] iterative pruning from alignment and tree

Hi John, John Denton wrote on 31/01/2011 01:30: Hi folks, I'm starting to use APE, and am trying to write a script to iteratively prune taxa from an alignment / tree combination and print the reduced datasets to separate files. I was thinking of using some combination of drop.tip + DNAbin,