Thanks a lot for your quick responses Liam and Graham,
I was warned I could have issues with spaces, but did not see these!
2012/5/9 Graham Slater
> Hi Agus,
>
> From what you have posted, it looks as though you have a white space
> between the genus abbreviation and the species name in the row
Hi Agus,
>From what you have posted, it looks as though you have a white space between
>the genus abbreviation and the species name in the row names for your csv but
>not for the tree's tip labels. Try running the following after reading it in
>but before attempting to match the names to the ti
Looks like this may be because your row names in your data frame have
spaces, while your tree tip labels do not.
Try:
rownames(example)<-sub(" ","",rownames(example))
example<-example[tree$tip.label,]
Help?
- Liam
--
Liam J. Revell
University of Massachusetts Boston
web: http://faculty.umb.e
