[R-sig-phylo] 95% HPD limits (from TreeAnnotator) for a chronogram?

Hi, I wonder if there is a way for generating a chronogram using as initial nodal values the ages given by TreeAnnotator delimiting the 95% credibility intervals of a Posterior Distribution of ages for each node? In fact, I mean two trees, one from values of the 5% limit and other from the 95%

Re: [R-sig-phylo] Statistical congruence tests for phylogenetic trees, e.g. CADM.global {ape}

Dear John, John Cumbers wrote on 25/06/2011 14:00: Dear all, Do you know if there an easy way to convert phylogenetic trees into the distance matrix files that CADM takes as input? You can compute these matrices with cophenetic, then concatenate them into a single matrix with rbind after