Hi Monica,
Perhaps it's because your bootstrap values are stored as node labels, instead
of edge labels. This problem is well documented here:
https://doi.org/10.1093/molbev/msx055
But perhaps it's a different issue in your case.
Cécile
On Jun 24, 2017, at 9:18 AM, Monica Carlsen
Hi everyone,
I have a set of gene trees (resulting from RAxML) analyses that I would
like to manipulate before inputting them into a coalescence analysis.
I have unrooted trees with bootstrap support as node labels. I would need
to collapse branches with less than 50%BS, and root these trees.
