[R-sig-phylo] phylogenetic correction for multiple samples per species along an ecological gradient

2018-07-31 Thread Nicolay Cunha
Dear list members, I would like to test a linear model between a predictor variable (e.g. altitude) and a dependent variable (e.g. number of flowers). For this, I do have several observations of individuals of 42 species along the predictor variable, but the number of observations do vary per

Re: [R-sig-phylo] phylogenetic correction for multiple samples per species along an ecological gradient

2018-07-31 Thread Theodore Garland
Two ways to go about this are here: Ives, A. R., P. E. Midford, and T. Garland, Jr. 2007. Within-species variation and measurement error in phylogenetic comparative methods. Systematic Biology 56:252–270. Felsenstein, J. 2008. Comparative methods with sampling error and within-species variation:

Re: [R-sig-phylo] phylogenetic correction for multiple samples per species along an ecological gradient

2018-07-31 Thread f . krah
In R the PhyloPars package might be interesting. Haven’t used it... though. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2703881/ Cheers Franz Sent from my mobile > On 31. Jul 2018, at 21:04, Nicolay Cunha wrote: > > Dear list members, > > I would like to test a linear model between a