Re: [Rdkit-devel] problem building rdkit

2018-03-19 Thread TJ O'Donnell
Thanks for your attention to this. Have a good ACS meeting and enjoy New Orleans! On Mon, Mar 19, 2018 at 7:04 AM, Greg Landrum wrote: > hmm, I'm stumped. > I'm going to have to try to reproduce the problem on a linux box. > Since I'm traveling this week (at the ACS in

Re: [Rdkit-devel] problem building rdkit

2018-03-19 Thread Greg Landrum
hmm, I'm stumped. I'm going to have to try to reproduce the problem on a linux box. Since I'm traveling this week (at the ACS in New Orleans), this may take a while. -greg On Mon, Mar 19, 2018 at 8:41 AM, TJ O'Donnell wrote: > I grep'd with a slight mod to your suggestion and

Re: [Rdkit-devel] problem building rdkit

2018-03-19 Thread Greg Landrum
Well, I don't see anything obvious there to explain why the serialization library is being treated differently from the others. Could you please look at (and send) the output of; grep boost_THREAD CMakeCache.txt grep boost_SERIAL CMakeCache.txt Best, -greg On Sun, Mar 18, 2018 at 10:31 PM, TJ

Re: [Rdkit-devel] problem building rdkit

2018-03-18 Thread TJ O'Donnell
FYI I cloned https://github.com/rdkit/rdkit.git and get the same error TJ On Sun, Mar 18, 2018 at 7:31 PM, TJ O'Donnell wrote: > Thanks for the quick reply, Greg. I just did a git pull and it merged in > lots of files. > I may try a clone to a "fresh" folder and see how that

Re: [Rdkit-devel] problem building rdkit

2018-03-18 Thread TJ O'Donnell
Thanks for the quick reply, Greg. I just did a git pull and it merged in lots of files. I may try a clone to a "fresh" folder and see how that goes. Anyway, here's the output from VERBOSE=1 make FilterCatalog tj@vmmint:~/RDKit/rdkit/build$ VERBOSE=1 make FilterCatalog /usr/bin/cmake

Re: [Rdkit-devel] problem building rdkit

2018-03-18 Thread Greg Landrum
Hi TJ, Hrm, that's ugly. Just to confirm: Are you building the master branch from github? It looks like there's no fundamental problem with master; at least the travis builds pass: https://travis-ci.org/rdkit/rdkit To help track this down, can you please send the results of doing: VERBOSE=1 make