Re: [Rdkit-discuss] mol_from_ctab doesn't preserve coordinates

2020-05-10 Thread Jan Holst Jensen
Hi Sharang (adding the list as I missed reply-all previously), Glad to hear that RDKit does what it is supposed to. I am unfortunately not familiar with how Datawarrior processes molecules, so I don't know if it does its own layout. To remove RDKit from the equation - if you can feed

Re: [Rdkit-discuss] GetSubstructMatches and unique match

2020-05-10 Thread Paolo Tosco
Dear Quoc-Tuan, I think I have come with a reasonably fast algorithm that seems to be more robust: https://gist.github.com/ptosco/dc4d27153e6e8e45aed654761e4d7409 Cheers, p. On 06/05/2020 09:11, Quoc-Tuan DO wrote: Dear Paolo, Thank you again for your code. Sorry for bothering you again.