Re: [Rdkit-discuss] Synthetic Accessibility (SA) score

2020-04-01 Thread Schuffenhauer, Ansgar
Hi Ganesh Chemical motives of fragments are not adding simply up. The linkage of two fragments creates new motives at the fragment linkage points not present in either of the fragments, and the circular substructures of the once terminal atoms are disappearing. Depending on the type of

Re: [Rdkit-discuss] FW: rdkit Chiral Morgan Fingerprint unexpected behaviour

2019-12-02 Thread Schuffenhauer, Ansgar
Senior Investigator I T +41 79 608 9063 ansgar.schuffenha...@novartis.com<mailto:ansgar.schuffenha...@novartis.com> Novartis Pharma AG NIBR From: Greg Landrum Sent: Montag, 2. Dezember 2019 10:25 To: Schuffenhauer, Ansgar Cc: rdkit-discuss@lists.sourceforge.net Subject: Re: [Rdkit-discuss] FW:

Re: [Rdkit-discuss] rdkit.MolStandardize tautomer

2019-07-24 Thread Schuffenhauer, Ansgar
Ansgar Schuffenhauer Senior Investigator I T +41 79 608 9063 ansgar.schuffenha...@novartis.com<mailto:ansgar.schuffenha...@novartis.com> Novartis Pharma AG NIBR From: Greg Landrum Sent: Dienstag, 23. Juli 2019 14:43 To: Schuffenhauer, Ansgar Cc: rdkit-discuss@lists.sourceforge.net Subje

Re: [Rdkit-discuss] rdkit.MolStandardize tautomer

2019-07-23 Thread Schuffenhauer, Ansgar
Ansgar Schuffenhauer Senior Investigator I T +41 79 608 9063 ansgar.schuffenha...@novartis.com<mailto:ansgar.schuffenha...@novartis.com> Novartis Pharma AG NIBR From: Greg Landrum Sent: Montag, 22. Juli 2019 17:42 To: Schuffenhauer, Ansgar Cc: rdkit-discuss@lists.sourceforge.net Subject: Re:

Re: [Rdkit-discuss] Rdkit-discuss Digest, Vol 141, Issue 16

2019-07-22 Thread Schuffenhauer, Ansgar
Dear all For the standardizer module (Chem.MolStandardize), what is the best way to change some of the tautomerizer rules? There is a data file in share/RDKit/Data/Molstandardize/tautomerTransforms.in which I assume to define the default. // NameSMARTS Bonds Charges 1,3

[Rdkit-discuss] job for opening at Novartis Basel

2018-04-11 Thread Schuffenhauer, Ansgar
Hi all We have a job opening at Novartis in Basel for a "Computational Drug Hunter", where rdkit experience is a relevant skill: You can find out more an apply under this link: https://www.novartis.com/careers/career-search/job-details?jobID=238569BR best regards Ansgar Ansgar