Re: [Rdkit-discuss] tests failed on Cygwin

2015-03-18 Thread Michal Krompiec
Dear Paolo, regarding test 13, would you mind trying to change line 1400 in /home/m212767/RDKit/Code/ForceField/UFF/testUFFForceField.cpp from [...] and tell me what the return value of MolTransforms::getDihedralDeg(mol-getConformer(), 1, 3, 6, 8) actually is? The return value is -9 (is it a

Re: [Rdkit-discuss] tests failed on Cygwin

2015-03-18 Thread Michal Krompiec
Hello, I'm still struggling with the Cygwin build. gdb shows that the segfault in FMCS (test 66) is caused by: #0 0x67d0115a in RDKit::MCSProgressCallbackTimeout(RDKit::MCSProgressData const, RDKit::MCSParameters const, void*) () from C:\cygwin\home\path\RDKit\lib\cygFMCS-1.dll What could it be?

Re: [Rdkit-discuss] tests failed on Cygwin

2015-03-18 Thread Paolo Tosco
Yes, it is definitely a rounding error, I will just have to make that check slightly more tolerant. For the time being, you may safely consider that test as passed. Cheers, p. On 18 Mar 2015, at 11:10, Michal Krompiec michal.kromp...@gmail.com wrote: Dear Paolo, regarding test 13, would