Re: [Rdkit-discuss] how to exclude conformers with wrong geometries

2017-03-01 Thread Thomas Evangelidis
Hi Greg, Actually this question is relevant to my recent thread about aligning MCS of 2 compounds. As also seen in the code I have posted in my last email, I first generate N conformers of each query compound and then optimize them using distance restraints in order to superimpose their MCS with

[Rdkit-discuss] Reactions saved as ctfile RD format

2017-03-01 Thread Steven Combs
Hi, Is there a way to save out reactions in the RD file format specified by the CTFile format specifications or should I just write out my own format? Steven Combs -- Check out the vibrant tech community on one of the