Re: [Rdkit-discuss] ModuleNotFoundError: No module named 'rdkit'

2021-04-09 Thread Andrés Sánchez Ruiz
Dear Peter, Thank you for your answer. When I write the first command I get nothing, it says it does not recognise the command which. I guess you want to know my python's version, if such is the case I have the 3.9.2. Regarding your second command I get the list with the enviroment in which I

Re: [Rdkit-discuss] What should be the citation reference for this rdMolAlign.GetCrippenO3A() in RDKit?

2021-04-09 Thread Paolo Tosco
Hi MIng, that's correct, but you should also reference the RDKit and the Crippen-Wildman paper: *J. Chem. Inf. Comput. Sci.* 1999, 39, 5, 868–873 https://doi.org/10.1021/ci990307l Cheers, p. On Fri, Apr 9, 2021 at 4:47 PM Ming Hao wrote: > Hello, > > Currently, I am using the method:

Re: [Rdkit-discuss] What should be the citation reference for this rdMolAlign.GetCrippenO3A() in RDKit?

2021-04-09 Thread Ming Hao
Thanks, Paolo. Yes, I will also cite other two. Best, Ming On Fri, Apr 9, 2021 at 10:59 AM Paolo Tosco wrote: > Hi MIng, > > that's correct, but you should also reference the RDKit and the > Crippen-Wildman paper: > *J. Chem. Inf. Comput. Sci.* 1999, 39, 5, 868–873 >

[Rdkit-discuss] What should be the citation reference for this rdMolAlign.GetCrippenO3A() in RDKit?

2021-04-09 Thread Ming Hao
Hello, Currently, I am using the method: rdMolAlign.*GetCrippenO3A**()* in RDKit for comparing two 3D small molecule conformations. I want to know what is the proper citation for this method? Is this: Open3DALIGN: an open-source software aimed at unsupervised ligand alignment Paolo

Re: [Rdkit-discuss] ModuleNotFoundError: No module named 'rdkit'

2021-04-09 Thread Peter St. John
what happens when you type $ which python or $ conda env list On Fri, Apr 9, 2021 at 6:07 AM Andrés Sánchez Ruiz < andressanchezrui...@gmail.com> wrote: > Dear Greg, > > I didn't know I had to send my answer to the discuss inbox... my bad. > First of all, thank you very much for your quick

Re: [Rdkit-discuss] ModuleNotFoundError: No module named 'rdkit'

2021-04-09 Thread Andrés Sánchez Ruiz
Dear Greg, I didn't know I had to send my answer to the discuss inbox... my bad. First of all, thank you very much for your quick answer. But yes, I also have ipython installed in my enviroment and still get the same error : ipython 7.22.0 py39hd4e2768_0