Re: [Rdkit-discuss] Using DrawAttachmentLine for bidentate ligands

2022-08-14 Thread Geoffrey Hutchison
Yep, I’m aware .. but it wouldn’t take too much work to at least ignore “<“ and “>” in the Open Babel parser.  In the meantime, my Python scripts will strip them from the SMILES strings before passing them to Open Babel. -Geoff On Aug 14, 2022 at 4:42:25 AM, David Cosgrove wrote: > Hi

Re: [Rdkit-discuss] Using DrawAttachmentLine for bidentate ligands

2022-08-14 Thread David Cosgrove
Hi Geoff, You should bear in mind that the dative bond syntax is an RDKIt extension to SMILES so is not guaranteed to be parsed correctly by other cheminformatics toolkits. Dave On Sun, 14 Aug 2022 at 00:42, Geoffrey Hutchison wrote: > mol =