[Rdkit-discuss] coordMap in EmbedMultipleConfs not working?

2018-11-14 Thread Jose A.
Dear RDKitters, I am writing a code to generate conformers of a given molecule constraining some atoms to occupy fixed positions with the coordMap option. However, the coordMap option does not see to work, as in the conformers generated the constraint atoms are at very different positions in each

Re: [Rdkit-discuss] coordMap in EmbedMultipleConfs not working?

2018-11-15 Thread Jose A.
heers, p. On 11/14/18 21:37, Jose A. wrote: Dear RDKitters, I am writing a code to generate conformers of a given molecule constraining some atoms to occupy fixed positions with the coordMap option. However, the coordMap option does not see to work, as in the conformers generated the constraint