Re: [Rdkit-discuss] SD file read error

2017-01-11 Thread Steve O'Hagan
verything from HMDB into RDKit, it seeems. Curt On Wed, Jan 11, 2017 at 11:39 AM, Steve O'Hagan <soha...@manchester.ac.uk <mailto:soha...@manchester.ac.uk>> wrote: With same code and fresh file download, works fine for me without error. ms contains 35177 molecules. Per

Re: [Rdkit-discuss] SD file read error

2017-01-11 Thread Steve O'Hagan
With same code and fresh file download, works fine for me without error. ms contains 35177 molecules. Perhaps your download was corrupt? On 11/01/2017 18:26, Milinda Samaraweera wrote: Dear Experts, I was trying to read in the attached SD file (downloaded from HMDB) and trying to calculate