[Rdkit-discuss] Searching in (Downloaded) Databases

2021-06-22 Thread Philipp Otten
Hey you lovely people, as I am creating a set of building blocks for my in-silico reaction, I downloaded various accessible databases (ChemBL28, GDB13, GDB17, Pubchem, emolecules and mcule) and want to just work through them with "HasSubstructMatch". Unfortunately I run into a "File parsing error:

[Rdkit-discuss] Multiprocessing/Threading in Python/Rdkit

2021-06-11 Thread Philipp Otten
Dear all lovely people, first of all, I'm rather new to to programming/python/Rdkit and probably my issue is quite easy to solve if you're more experienced. So I wrote a Python-Sycript simulating a reaction-workflow for a multi step synthesis with a lot of different building blocks. The program