Re: [Rdkit-discuss] Need help with MMFFOptimize

2020-08-22 Thread Paolo Tosco
Hi Joanna, could you please provide some context and paste your failing code? You seem to be referring to an e-mail thread that I can't find. Thanks, cheers p. On Sat, Aug 22, 2020 at 1:56 PM ITS RDC wrote: > Dear all/Greg, > > The conformation generation worked when I used the >

[Rdkit-discuss] Need help with MMFFOptimize

2020-08-22 Thread ITS RDC
Dear all/Greg, The conformation generation worked when I used the AllChem.EmbedMultipleConfs ETKDG. But when I tried using AllChem.MMFFOptimizeMoleculeConfs () and AllChem.MMFFOptimize but it always gives the following output: ValueError: Bad Conformer Id I only followed the manual. Your