Re: [Rdkit-discuss] proper technical term for generating virtual compounds with rdkit and smarts

2020-09-25 Thread Marco Stenta
> *Von:* Bennion, Brian via Rdkit-discuss < >> rdkit-discuss@lists.sourceforge.net> >> *Gesendet:* Freitag, 25. September 2020 07:19 >> *An:* RDKit Discuss >> *Betreff:* [Rdkit-discuss] proper technical term for generating virtual >> compounds with rdkit and smarts

Re: [Rdkit-discuss] proper technical term for generating virtual compounds with rdkit and smarts

2020-09-25 Thread Ivan Tubert-Brohman
cuss@lists.sourceforge.net> > *Gesendet:* Freitag, 25. September 2020 07:19 > *An:* RDKit Discuss > *Betreff:* [Rdkit-discuss] proper technical term for generating virtual > compounds with rdkit and smarts > > hello > > I have a paper in review and is intended for a larg

Re: [Rdkit-discuss] proper technical term for generating virtual compounds with rdkit and smarts

2020-09-25 Thread Thomas Strunz
reff: [Rdkit-discuss] proper technical term for generating virtual compounds with rdkit and smarts hello I have a paper in review and is intended for a large audience that has synthetic chemists, biologist and comp chem. One reviewer had issues with the term in-silico syntheses. I used rdkit

Re: [Rdkit-discuss] proper technical term for generating virtual compounds with rdkit and smarts

2020-09-25 Thread Rafal Roszak
Hello Brian, On Fri, 25 Sep 2020 05:19:14 + "Bennion, Brian via Rdkit-discuss" wrote: > I have a paper in review and is intended for a large audience that has > synthetic chemists, biologist and comp chem. > One reviewer had issues with the term in-silico syntheses. > I used rdkit and

Re: [Rdkit-discuss] proper technical term for generating virtual compounds with rdkit and smarts

2020-09-25 Thread Stephen Roughley via Rdkit-discuss
I recall the first time I heard the term was in a project meeting in RiboTargets back in around 1999/2000. One of our modelling group used it after hearing discussion of results of in vitro and in vivo studies being discussed. My recollection is that there was a certain amount of amusement at

Re: [Rdkit-discuss] proper technical term for generating virtual compounds with rdkit and smarts

2020-09-25 Thread Hannes Loeffler
Without your more detailled explanation of what that term specifically means I was wondering too at first. But then I did the most obvious thing: search for it online and found https://scholar.google.com/scholar?q=%22in+silico+synthesis%22=en_sdt=0_vis=1=scholart . Looks to me other people use

Re: [Rdkit-discuss] proper technical term for generating virtual compounds with rdkit and smarts

2020-09-25 Thread Greg Landrum
I actually like *in silico* synthesis - though I don't think I've seen it before - but I can imagine a chemist finding it objectionable. I would probably use "virtual library enumeration" -greg On Fri, Sep 25, 2020 at 7:21 AM Bennion, Brian via Rdkit-discuss <

[Rdkit-discuss] proper technical term for generating virtual compounds with rdkit and smarts

2020-09-24 Thread Bennion, Brian via Rdkit-discuss
hello I have a paper in review and is intended for a large audience that has synthetic chemists, biologist and comp chem. One reviewer had issues with the term in-silico syntheses. I used rdkit and smarts reactions to generate large libraries of compounds for our research project. Is there a