Another +1 for MolVS.
___________________
JW Feng, Ph.D.
Denali Therapeutics Inc.
151 Oyster Point Blvd, 2nd Floor, South San Francisco, CA 94080 | (650)
270-0628
On Tue, Jan 16, 2018 at 10:04 AM, <
rdkit-discuss-requ...@lists.sourceforge.net> wrote:
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> 1. Re: RDKit and Google Summer of Code 2018 (Brian Cole)
> 2. Re: RDKit and Google Summer of Code 2018 (JP)
> 3. Re: RDKit and Google Summer of Code 2018 (George Papadatos)
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> ----------------------------------------------------------------------
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> Message: 1
> Date: Tue, 16 Jan 2018 10:00:00 -0500
> From: Brian Cole <col...@gmail.com>
> To: Francois BERENGER <beren...@bioreg.kyushu-u.ac.jp>
> Cc: RDKit Discuss <rdkit-discuss@lists.sourceforge.net>
> Subject: Re: [Rdkit-discuss] RDKit and Google Summer of Code 2018
> Message-ID:
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> gmail.com>
> Content-Type: text/plain; charset="utf-8"
>
> +1 to the MolVS project as well.
>
> Perhaps an easy bite-size project is to incorporate the open source mae
> parser code into core RDKit: https://github.com/schrodinger/maeparser
>
>
> On Mon, Jan 15, 2018 at 9:08 PM, Francois BERENGER <
> beren...@bioreg.kyushu-u.ac.jp> wrote:
>
> > On 01/16/2018 05:51 AM, Tim Dudgeon wrote:
> > > Incorporating and "industrialising" Matt's MolVS tautomer and
> > > standardizer code?
> > > http://molvs.readthedocs.io/en/latest/index.html
> >
> > If we can vote, I would vote for this one.
> >
> > > On 15/01/18 07:09, Greg Landrum wrote:
> > >> Dear all,
> > >>
> > >> We've been invited again to participate in the OpenChemistry
> > >> application for Google Summer of Code.
> > >>
> > >> In order to participate we need ideas for projects and mentors to go
> > >> along with them.
> > >>
> > >> The current list of RDKit ideas is being maintained here:
> > >> http://wiki.openchemistry.org/GSoC_Ideas_2018#RDKit_Project_Ideas
> > >>
> > >> (Note: at the point that I'm pressing "send", that's still a copy of
> > >> last year's project ideas).
> > >>
> > >> If you're willing to be a mentor (please ask me about the ~5
> > >> hours/week required here) or have ideas, please reply to this thread.
> > >>
> > >> Best,
> > >> -greg
> > >>
> > >>
> > >> ------------------------------------------------------------
> > ------------------
> > >> Check out the vibrant tech community on one of the world's most
> > >> engaging tech sites, Slashdot.org! http://sdm.link/slashdot
> > >>
> > >>
> > >> _______________________________________________
> > >> Rdkit-discuss mailing list
> > >> Rdkit-discuss@lists.sourceforge.net
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> > >
> > >
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> Message: 2
> Date: Tue, 16 Jan 2018 18:19:46 +0100
> From: JP <jeanpaul.ebe...@inhibox.com>
> To: Brian Cole <col...@gmail.com>
> Cc: Francois BERENGER <beren...@bioreg.kyushu-u.ac.jp>, RDKit Discuss
> <rdkit-discuss@lists.sourceforge.net>
> Subject: Re: [Rdkit-discuss] RDKit and Google Summer of Code 2018
> Message-ID:
> <CAK3of5XRDf7sO5YhP4y3us1zMBpoajk26caqTSQH3pW3KYzkGQ@mail.
> gmail.com>
> Content-Type: text/plain; charset="utf-8"
>
> Joining the fray, +1 for MolVS
>
> On 16 January 2018 at 16:00, Brian Cole <col...@gmail.com> wrote:
>
> > +1 to the MolVS project as well.
> >
> > Perhaps an easy bite-size project is to incorporate the open source mae
> > parser code into core RDKit: https://github.com/schrodinger/maeparser
> >
> >
> > On Mon, Jan 15, 2018 at 9:08 PM, Francois BERENGER <
> > beren...@bioreg.kyushu-u.ac.jp> wrote:
> >
> >> On 01/16/2018 05:51 AM, Tim Dudgeon wrote:
> >> > Incorporating and "industrialising" Matt's MolVS tautomer and
> >> > standardizer code?
> >> > http://molvs.readthedocs.io/en/latest/index.html
> >>
> >> If we can vote, I would vote for this one.
> >>
> >> > On 15/01/18 07:09, Greg Landrum wrote:
> >> >> Dear all,
> >> >>
> >> >> We've been invited again to participate in the OpenChemistry
> >> >> application for Google Summer of Code.
> >> >>
> >> >> In order to participate we need ideas for projects and mentors to go
> >> >> along with them.
> >> >>
> >> >> The current list of RDKit ideas is being maintained here:
> >> >> http://wiki.openchemistry.org/GSoC_Ideas_2018#RDKit_Project_Ideas
> >> >>
> >> >> (Note: at the point that I'm pressing "send", that's still a copy of
> >> >> last year's project ideas).
> >> >>
> >> >> If you're willing to be a mentor (please ask me about the ~5
> >> >> hours/week required here) or have ideas, please reply to this thread.
> >> >>
> >> >> Best,
> >> >> -greg
> >> >>
> >> >>
> >> >> ------------------------------------------------------------
> >> ------------------
> >> >> Check out the vibrant tech community on one of the world's most
> >> >> engaging tech sites, Slashdot.org! http://sdm.link/slashdot
> >> >>
> >> >>
> >> >> _______________________________________________
> >> >> Rdkit-discuss mailing list
> >> >> Rdkit-discuss@lists.sourceforge.net
> >> >> https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
> >> >
> >> >
> >> >
> >> > ------------------------------------------------------------
> >> ------------------
> >> > Check out the vibrant tech community on one of the world's most
> >> > engaging tech sites, Slashdot.org! http://sdm.link/slashdot
> >> >
> >> >
> >> >
> >> > _______________________________________________
> >> > Rdkit-discuss mailing list
> >> > Rdkit-discuss@lists.sourceforge.net
> >> > https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
> >> >
> >>
> >> ------------------------------------------------------------
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> >
> >
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> Message: 3
> Date: Tue, 16 Jan 2018 18:04:04 +0000
> From: George Papadatos <gpapada...@gmail.com>
> To: JP <jeanpaul.ebe...@inhibox.com>
> Cc: Brian Cole <col...@gmail.com>, RDKit Discuss
> <rdkit-discuss@lists.sourceforge.net>
> Subject: Re: [Rdkit-discuss] RDKit and Google Summer of Code 2018
> Message-ID: <7dcde559-d1b1-4856-93fa-9128ee7fb...@gmail.com>
> Content-Type: text/plain; charset="us-ascii"
>
> Same here. I would also add the standardisation work done by Francis
> Atkinson at the EBI as an additional starting point.
>
> George.
>
> Sent from my giPhone
>
> > On 16 Jan 2018, at 17:19, JP <jeanpaul.ebe...@inhibox.com> wrote:
> >
> > Joining the fray, +1 for MolVS
> >
> >> On 16 January 2018 at 16:00, Brian Cole <col...@gmail.com> wrote:
> >> +1 to the MolVS project as well.
> >>
> >> Perhaps an easy bite-size project is to incorporate the open source mae
> parser code into core RDKit: https://github.com/schrodinger/maeparser
> >>
> >>
> >>> On Mon, Jan 15, 2018 at 9:08 PM, Francois BERENGER <
> beren...@bioreg.kyushu-u.ac.jp> wrote:
> >>> On 01/16/2018 05:51 AM, Tim Dudgeon wrote:
> >>> > Incorporating and "industrialising" Matt's MolVS tautomer and
> >>> > standardizer code?
> >>> > http://molvs.readthedocs.io/en/latest/index.html
> >>>
> >>> If we can vote, I would vote for this one.
> >>>
> >>> > On 15/01/18 07:09, Greg Landrum wrote:
> >>> >> Dear all,
> >>> >>
> >>> >> We've been invited again to participate in the OpenChemistry
> >>> >> application for Google Summer of Code.
> >>> >>
> >>> >> In order to participate we need ideas for projects and mentors to go
> >>> >> along with them.
> >>> >>
> >>> >> The current list of RDKit ideas is being maintained here:
> >>> >> http://wiki.openchemistry.org/GSoC_Ideas_2018#RDKit_Project_Ideas
> >>> >>
> >>> >> (Note: at the point that I'm pressing "send", that's still a copy of
> >>> >> last year's project ideas).
> >>> >>
> >>> >> If you're willing to be a mentor (please ask me about the ~5
> >>> >> hours/week required here) or have ideas, please reply to this
> thread.
> >>> >>
> >>> >> Best,
> >>> >> -greg
> >>> >>
> >>> >>
> >>> >> ------------------------------------------------------------
> ------------------
> >>> >> Check out the vibrant tech community on one of the world's most
> >>> >> engaging tech sites, Slashdot.org! http://sdm.link/slashdot
> >>> >>
> >>> >>
> >>> >> _______________________________________________
> >>> >> Rdkit-discuss mailing list
> >>> >> Rdkit-discuss@lists.sourceforge.net
> >>> >> https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
> >>> >
> >>> >
> >>> >
> >>> > ------------------------------------------------------------
> ------------------
> >>> > Check out the vibrant tech community on one of the world's most
> >>> > engaging tech sites, Slashdot.org! http://sdm.link/slashdot
> >>> >
> >>> >
> >>> >
> >>> > _______________________________________________
> >>> > Rdkit-discuss mailing list
> >>> > Rdkit-discuss@lists.sourceforge.net
> >>> > https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
> >>> >
> >>>
> >>> ------------------------------------------------------------
> ------------------
> >>> Check out the vibrant tech community on one of the world's most
> >>> engaging tech sites, Slashdot.org! http://sdm.link/slashdot
> >>> _______________________________________________
> >>> Rdkit-discuss mailing list
> >>> Rdkit-discuss@lists.sourceforge.net
> >>> https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
> >>
> >>
> >> ------------------------------------------------------------
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> >> Check out the vibrant tech community on one of the world's most
> >> engaging tech sites, Slashdot.org! http://sdm.link/slashdot
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> >> Rdkit-discuss@lists.sourceforge.net
> >> https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
> >>
> >
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