Author: bugman
Date: Sun Nov 20 10:45:42 2016
New Revision: 28307
URL: http://svn.gna.org/viewcvs/relax?rev=28307&view=rev
Log:
Updates to many frame order test suite shared data relax scripts.
These scripts are used for data generation and display, and are not part of the
test suite. The
updat
Author: bugman
Date: Thu Nov 17 18:00:39 2016
New Revision: 28306
URL: http://svn.gna.org/viewcvs/relax?rev=28306&view=rev
Log:
Expanded the release checklist instructions for creating the README.rst files.
Modified:
trunk/docs/devel/Release_Checklist
Modified: trunk/docs/devel/Release_Chec
Author: bugman
Date: Thu Nov 17 14:37:45 2016
New Revision: 28305
URL: http://svn.gna.org/viewcvs/relax?rev=28305&view=rev
Log:
Added release instructions for creating the README.rst files for the download
area.
This is for using the custom html2rest at
ttps://sourceforge.net/p/nmr-relax/code-p
Author: bugman
Date: Wed Nov 16 19:51:36 2016
New Revision: 28304
URL: http://svn.gna.org/viewcvs/relax?rev=28304&view=rev
Log:
Even more div box fixes.
Modified:
website/links.html
Modified: website/links.html
URL:
http://svn.gna.org/viewcvs/relax/website/links.html?rev=28304&r1=28303&r2=
Author: bugman
Date: Wed Nov 16 18:44:50 2016
New Revision: 28303
URL: http://svn.gna.org/viewcvs/relax?rev=28303&view=rev
Log:
The "Protein dynamics" and "relax libraries" sections have been split into a
"main_box" div box.
Modified:
website/links.html
Modified: website/links.html
URL:
h
Author: bugman
Date: Wed Nov 16 18:03:15 2016
New Revision: 28302
URL: http://svn.gna.org/viewcvs/relax?rev=28302&view=rev
Log:
More div box fixes for http://www.nmr-relax.com/links.html.
Modified:
website/links.html
Modified: website/links.html
URL:
http://svn.gna.org/viewcvs/relax/websit
Author: bugman
Date: Wed Nov 16 16:48:38 2016
New Revision: 28301
URL: http://svn.gna.org/viewcvs/relax?rev=28301&view=rev
Log:
The 4.0.0 and 4.0.1 download links now point to
http://www.nmr-relax.com/download_request.html.
These releases are no longer in the download area.
Modified:
websi
Author: bugman
Date: Wed Nov 16 16:33:05 2016
New Revision: 28300
URL: http://svn.gna.org/viewcvs/relax?rev=28300&view=rev
Log:
Fixes for the index at http://www.nmr-relax.com/links.html.
Modified:
website/links.html
Modified: website/links.html
URL:
http://svn.gna.org/viewcvs/relax/websit
Author: bugman
Date: Wed Nov 16 16:32:07 2016
New Revision: 28299
URL: http://svn.gna.org/viewcvs/relax?rev=28299&view=rev
Log:
Div box fixes for the http://www.nmr-relax.com/links.html page.
Modified:
website/links.html
Modified: website/links.html
URL:
http://svn.gna.org/viewcvs/relax/we
ax. The
relax developer Gna! pages are (in alphabetical order): http://gna.org/users/bugman";>Edward d'Auvergne, http://gna.org/users/michaelbieri";>Michael Bieri, http://gna.org/users/macraild";>Chris MacRaild, http://gna.org/users/semor";>Sébastien Morin, http://gn
Gna! pages are (in alphabetical order): http://gna.org/users/bugman";>Edward d'Auvergne, http://gna.org/users/michaelbieri";>Michael Bieri, http://gna.org/users/macraild";>Chris MacRaild, http://gna.org/users/semor";>Sébastien Morin, http://gna.org/users/
Author: bugman
Date: Wed Nov 16 15:37:22 2016
New Revision: 28296
URL: http://svn.gna.org/viewcvs/relax?rev=28296&view=rev
Log:
The 3.3.6 to 3.3.8 download links now point to
http://www.nmr-relax.com/download_request.html.
These releases were removed from the download area a long time ago.
Mod
Author: bugman
Date: Wed Nov 16 15:34:02 2016
New Revision: 28295
URL: http://svn.gna.org/viewcvs/relax?rev=28295&view=rev
Log:
Changed all the relax download links to point to the new release subdirectories.
This is for http://www.nmr-relax.com/download.html.
Modified:
website/download.htm
Author: bugman
Date: Wed Nov 16 14:10:32 2016
New Revision: 28294
URL: http://svn.gna.org/viewcvs/relax?rev=28294&view=rev
Log:
Updates to the upload section of the release checklist document for sending
files to SourceForge.
Modified:
trunk/docs/devel/Release_Checklist
Modified: trunk/doc
r): http://gna.org/users/bugman";>Edward d'Auvergne, http://gna.org/users/michaelbieri";>Michael Bieri, http://gna.org/users/macraild";>Chris MacRaild, http://gna.org/users/semor";>Sébastien Morin, http://gna.org/users/pansapiens";>Andrew Perry, http://gna.
Author: bugman
Date: Wed Nov 16 12:07:50 2016
New Revision: 28292
URL: http://svn.gna.org/viewcvs/relax?rev=28292&view=rev
Log:
More precision decreases in the Rx.test_r1_analysis GUI test.
This is to allow the test to pass on wxPython-Phoenix and Python 3.
Modified:
trunk/test_suite/gui_tes
Author: bugman
Date: Tue Nov 15 21:28:19 2016
New Revision: 28291
URL: http://svn.gna.org/viewcvs/relax?rev=28291&view=rev
Log:
Updated the copyright notice in the GUI splash screen to 2001-2016.
Modified:
trunk/graphics/misc/relaxGUI_splash.png
trunk/graphics/misc/relaxGUI_splash.xcf
M
Author: bugman
Date: Tue Nov 15 20:56:10 2016
New Revision: 28290
URL: http://svn.gna.org/viewcvs/relax?rev=28290&view=rev
Log:
Removal of unused variables from the bash completion relax script.
Modified:
trunk/docs/bash_completion.sh
Modified: trunk/docs/bash_completion.sh
URL:
http://svn
Author: bugman
Date: Tue Nov 15 20:50:27 2016
New Revision: 28289
URL: http://svn.gna.org/viewcvs/relax?rev=28289&view=rev
Log:
Fine tuning of the bash completion relax script.
The option "-o nospace" for "complete" has been removed as spaces are not added
for directories
anyway. This means tha
Author: bugman
Date: Tue Nov 15 20:34:48 2016
New Revision: 28288
URL: http://svn.gna.org/viewcvs/relax?rev=28288&view=rev
Log:
Improvements for the bash completion relax script.
Directories and relax scripts are now much better handled.
Modified:
trunk/docs/bash_completion.sh
Modified: tr
,0 +1,92 @@
+###
+# #
+# Copyright (C) 2016 Edward d&
016
@@ -1,7 +1,7 @@
###
# #
# Copyright (C) 2009-2011 Michael Bieri #
-# Copyright (C) 2010-2014 Edward d'Auvergne #
+# Copyright (C) 2010-2
016
@@ -1,7 +1,7 @@
###
# #
# Copyright (C) 2009-2011 Michael Bieri #
-# Copyright (C) 2010-2016 Edward d'Auvergne #
+# Copyright (C) 2010-2
Author: bugman
Date: Tue Nov 15 16:10:00 2016
New Revision: 28284
URL: http://svn.gna.org/viewcvs/relax?rev=28284&view=rev
Log:
Keyword to positional argument conversion for the GUI wx.Font() calls.
A number of these were being called with keyword arguments, however the old
wxPython and Phoenix
016
@@ -1,7 +1,7 @@
###
# #
# Copyright (C) 2009-2011 Michael Bieri #
-# Copyright (C) 2010-2014 Edward d'Auvergne #
+# Copyright (C) 2010-2
Author: bugman
Date: Tue Nov 15 15:44:42 2016
New Revision: 28280
URL: http://svn.gna.org/viewcvs/relax?rev=28280&view=rev
Log:
Keyword to positional argument conversion for the GUI
wx.ScrolledWindow.EnableScrolling() calls.
These function calls were using keyword arguments, however the old wxPy
016
@@ -1,6 +1,6 @@
###
# #
-# Copyright (C) 2010-2013 Edward d'Auvergne #
+# Copyright (C) 2010-2
/gui_tests/rx.py(original)
+++ trunk/test_suite/gui_tests/rx.pyTue Nov 15 15:44:47 2016
@@ -1,6 +1,6 @@
###
# #
-# Copyright (C) 2006-2014 E
016
@@ -1,6 +1,6 @@
###
# #
-# Copyright (C) 2015 Edward d'Auvergne#
+# Copyright (C) 2015-2
15 11:33:19 2016
@@ -1,7 +1,7 @@
###
# #
# Copyright (C) 2009 Michael Bieri#
-# Copyright (C
Author: bugman
Date: Mon Nov 14 23:16:52 2016
New Revision: 28277
URL: http://svn.gna.org/viewcvs/relax?rev=28277&view=rev
Log:
Python 3 fix for the combo list sequence elements.
Comparison of integers to values of None are not allowed.
Modified:
trunk/gui/input_elements/sequence.py
Modifie
ght (C) 2009 Michael Bieri#
-# Copyright (C) 2010-2013 Edward d'Auvergne #
+# Copyright (C) 2010-2016 Edward d'Auvergne #
# #
# Th
Author: bugman
Date: Mon Nov 14 21:22:01 2016
New Revision: 28275
URL: http://svn.gna.org/viewcvs/relax?rev=28275&view=rev
Log:
Removal of the Mac OS X taskbar icon functionality.
This code has been disabled since its deletion back in Jun 2012 (r16772), as it
does not work with
wxPython 2.8 or 2
Author: bugman
Date: Mon Nov 14 20:23:03 2016
New Revision: 28274
URL: http://svn.gna.org/viewcvs/relax?rev=28274&view=rev
Log:
Python 3 bugfix for the Relax_disp.test_bug_24601_r2eff_missing_data system
test.
Tab characters rather than spaces made the system test script unloadable in
Python 3.
Author: bugman
Date: Mon Nov 14 19:12:06 2016
New Revision: 28273
URL: http://svn.gna.org/viewcvs/relax?rev=28273&view=rev
Log:
Clarifications and minor expansion of the release checklist document.
Modified:
trunk/docs/devel/Release_Checklist
Modified: trunk/docs/devel/Release_Checklist
URL
016
@@ -1,6 +1,6 @@
###
# #
-# Copyright (C) 2003-2015 Edward d'Auvergne #
+# Copyright (C) 2003-2
Author: bugman
Date: Fri Oct 28 15:44:54 2016
New Revision: 28271
URL: http://svn.gna.org/viewcvs/relax?rev=28271&view=rev
Log:
Updated the relax version number to 4.0.3 on the
http://www.nmr-relax.com/api/index.html webpage.
Modified:
website/api/index.html
Modified: website/api/index.htm
Author: bugman
Date: Fri Oct 28 15:42:03 2016
New Revision: 28270
URL: http://svn.gna.org/viewcvs/relax?rev=28270&view=rev
Log:
Updated the relax API documentation at http://www.nmr-relax.com/api/4.0/ to
version 4.0.3.
Removed:
website/api/4.0/target_functions.relax_fit-module.html
webs
Author: bugman
Date: Fri Oct 28 15:26:27 2016
New Revision: 28268
URL: http://svn.gna.org/viewcvs/relax?rev=28268&view=rev
Log:
Updated the http://www.nmr-relax.com/download.html webpage for the relax 4.0.3
release.
Modified:
website/download.html
[This mail would be too long, it was short
Author: bugman
Date: Fri Oct 28 12:34:05 2016
New Revision: 28267
URL: http://svn.gna.org/viewcvs/relax?rev=28267&view=rev
Log:
Backported the relax 4.0.3 CHANGES file changes to trunk.
The command used was:
svn merge -r28265:28266 svn+ssh://bug...@svn.gna.org/svn/relax/tags/4.0.3 .
Modified:
Author: bugman
Date: Fri Oct 28 12:32:26 2016
New Revision: 28266
URL: http://svn.gna.org/viewcvs/relax?rev=28266&view=rev
Log:
Updated the CHANGES file for relax 4.0.3.
Modified:
tags/4.0.3/docs/CHANGES
Modified: tags/4.0.3/docs/CHANGES
URL:
http://svn.gna.org/viewcvs/relax/tags/4.0.3/doc
Author: bugman
Date: Fri Oct 28 11:04:29 2016
New Revision: 28265
URL: http://svn.gna.org/viewcvs/relax?rev=28265&view=rev
Log:
Added the relax 4.0.3 manual to the repository.
Added:
tags/4.0.3/docs/relax.pdf (with props)
Added: tags/4.0.3/docs/relax.pdf
URL:
http://svn.gna.org/viewcvs/r
Author: bugman
Date: Fri Oct 28 10:53:49 2016
New Revision: 28264
URL: http://svn.gna.org/viewcvs/relax?rev=28264&view=rev
Log:
Updated the version number to relax 4.0.3.
Modified:
tags/4.0.3/version.py
Modified: tags/4.0.3/version.py
URL:
http://svn.gna.org/viewcvs/relax/tags/4.0.3/versio
Author: bugman
Date: Fri Oct 28 10:42:19 2016
New Revision: 28263
URL: http://svn.gna.org/viewcvs/relax?rev=28263&view=rev
Log:
relax version 4.0.3.
This is a minor feature and bugfix release. The structure.rmsd user function
can now calculate
per-atom RMSDs, structure superimposition is now or
Author: bugman
Date: Thu Oct 27 12:48:18 2016
New Revision: 28262
URL: http://svn.gna.org/viewcvs/relax?rev=28262&view=rev
Log:
Added support in the information printout for Windows versions of the 'file'
program.
This enables the C modules to be identified as 32 or 64-bit, if the 'file'
progra
Author: bugman
Date: Thu Oct 27 12:35:53 2016
New Revision: 28261
URL: http://svn.gna.org/viewcvs/relax?rev=28261&view=rev
Log:
Windows scons C module compilation now defaults to 32-bit.
This is because the default Python downloads are 32-bit. And many libraries
(e.g. numpy and scipy)
are only
Author: bugman
Date: Thu Oct 27 10:15:06 2016
New Revision: 28260
URL: http://svn.gna.org/viewcvs/relax?rev=28260&view=rev
Log:
Added the MPI version information to the mpi4py information printout.
Modified:
trunk/info.py
Modified: trunk/info.py
URL:
http://svn.gna.org/viewcvs/relax/trunk/
Author: bugman
Date: Tue Oct 4 16:35:02 2016
New Revision: 28259
URL: http://svn.gna.org/viewcvs/relax?rev=28259&view=rev
Log:
Set the svn:executable property on the OpenMPI installation testing scripts.
Modified:
trunk/devel_scripts/openmpi_test_install_bash.sh (props changed)
trunk/
Author: bugman
Date: Thu Aug 11 19:16:23 2016
New Revision: 28228
URL: http://svn.gna.org/viewcvs/relax?rev=28228&view=rev
Log:
Removed a debugging printout statement.
Modified:
trunk/test_suite/system_tests/relax_disp.py
Modified: trunk/test_suite/system_tests/relax_disp.py
URL:
http://sv
Author: bugman
Date: Thu Aug 11 16:56:55 2016
New Revision: 28227
URL: http://svn.gna.org/viewcvs/relax?rev=28227&view=rev
Log:
Removed a debugging statement introduced at r28204 which breaks Python3 support.
Modified:
trunk/lib/plotting/grace.py
Modified: trunk/lib/plotting/grace.py
URL:
Author: bugman
Date: Tue Jun 7 17:27:04 2016
New Revision: 28226
URL: http://svn.gna.org/viewcvs/relax?rev=28226&view=rev
Log:
Huge speed up for the superimposition of a large number of structures.
The internal structural object validate_models() method was being called once
for each structure
24&view=diff
==
--- trunk/target_functions/exponential_inv.c(original)
+++ trunk/target_functions/exponential_inv.cFri Jun 3 11:03:54 2016
@@ -1,5 +1,5 @@
/*
- * Copyright (C) 2006-2014 Edward d'Auvergne
+ * Copyright (C) 2006-2
===
--- trunk/test_suite/system_tests/relax_fit.py (original)
+++ trunk/test_suite/system_tests/relax_fit.py Fri Jun 3 11:03:56 2016
@@ -1,6 +1,6 @@
#####
Author: bugman
Date: Thu Jun 2 19:09:34 2016
New Revision: 28220
URL: http://svn.gna.org/viewcvs/relax?rev=28220&view=rev
Log:
Addition of the atomic boolean argument to the structure.rmsd user function
front end.
This will be used to enable the calculation of per-atom RMSDs.
Modified:
tru
Author: bugman
Date: Thu Jun 2 19:09:36 2016
New Revision: 28221
URL: http://svn.gna.org/viewcvs/relax?rev=28221&view=rev
Log:
Created the Structure.test_rmsd_spins system test for checking the per-atom
RMSD calculation.
This is for the new option in the structure.rmsd user function.
Modified:
l)
+++ trunk/lib/structure/statistics.py Thu Jun 2 19:09:39 2016
@@ -1,6 +1,6 @@
###
# #
-# Copyright (C) 2011-2015 E
Author: bugman
Date: Thu Jun 2 19:09:40 2016
New Revision: 28223
URL: http://svn.gna.org/viewcvs/relax?rev=28223&view=rev
Log:
Fix for bug #24723 (https://gna.org/bugs/?24723).
This is the bug that the mean RMSD from the structure.rmsd user function is
incorrectly
calculated - it should be a qu
Author: bugman
Date: Fri May 13 19:11:54 2016
New Revision: 28219
URL: http://svn.gna.org/viewcvs/relax?rev=28219&view=rev
Log:
Small edits for the CHANGES file.
Modified:
trunk/docs/CHANGES
Modified: trunk/docs/CHANGES
URL:
http://svn.gna.org/viewcvs/relax/trunk/docs/CHANGES?rev=28219&r1=
Author: bugman
Date: Fri May 13 17:44:47 2016
New Revision: 28218
URL: http://svn.gna.org/viewcvs/relax?rev=28218&view=rev
Log:
Updated the relax version number to 4.0.2 on the
http://www.nmr-relax.com/api/index.html webpage.
Modified:
website/api/index.html
Modified: website/api/index.htm
Author: bugman
Date: Fri May 13 17:34:28 2016
New Revision: 28217
URL: http://svn.gna.org/viewcvs/relax?rev=28217&view=rev
Log:
Updated the relax API documentation at http://www.nmr-relax.com/api/4.0/ to
version 4.0.2.
Added:
website/api/4.0/pipe_control.system-module.html
website/api/4
Author: bugman
Date: Fri May 13 17:29:16 2016
New Revision: 28216
URL: http://svn.gna.org/viewcvs/relax?rev=28216&view=rev
Log:
Added some more user function renaming redirects.
Modified:
website/.setup_redirects.py
Modified: website/.setup_redirects.py
URL:
http://svn.gna.org/viewcvs/rela
Author: bugman
Date: Fri May 13 17:28:07 2016
New Revision: 28215
URL: http://svn.gna.org/viewcvs/relax?rev=28215&view=rev
Log:
Updated the relax HTML manual at http://www.nmr-relax.com/manual/index.html to
version 4.0.2.
Added:
website/manual/folder-development.png (with props)
websi
Author: bugman
Date: Fri May 13 17:22:43 2016
New Revision: 28214
URL: http://svn.gna.org/viewcvs/relax?rev=28214&view=rev
Log:
Updated the http://www.nmr-relax.com/download.html webpage for the relax 4.0.2
release.
Modified:
website/download.html
[This mail would be too long, it was short
Author: bugman
Date: Fri May 13 16:43:15 2016
New Revision: 28213
URL: http://svn.gna.org/viewcvs/relax?rev=28213&view=rev
Log:
Backported the relax 4.0.2 CHANGES file changes to trunk.
The command used was:
svn merge -r28211:28212 svn+ssh://bug...@svn.gna.org/svn/relax/tags/4.0.2 .
Modified:
Author: bugman
Date: Fri May 13 16:42:06 2016
New Revision: 28212
URL: http://svn.gna.org/viewcvs/relax?rev=28212&view=rev
Log:
Updated the CHANGES file for relax 4.0.2.
Modified:
tags/4.0.2/docs/CHANGES
Modified: tags/4.0.2/docs/CHANGES
URL:
http://svn.gna.org/viewcvs/relax/tags/4.0.2/doc
Author: bugman
Date: Fri May 13 16:06:22 2016
New Revision: 28209
URL: http://svn.gna.org/viewcvs/relax?rev=28209&view=rev
Log:
relax version 4.0.2.
This is a minor feature and bugfix release. The new user functions system.cd
and system.pwd have
been added to allow the working directory to be c
Author: bugman
Date: Fri May 13 16:21:23 2016
New Revision: 28211
URL: http://svn.gna.org/viewcvs/relax?rev=28211&view=rev
Log:
Added the relax 4.0.2 manual to the repository.
Added:
tags/4.0.2/docs/relax.pdf (with props)
Added: tags/4.0.2/docs/relax.pdf
URL:
http://svn.gna.org/viewcvs/r
Author: bugman
Date: Fri May 13 16:11:34 2016
New Revision: 28210
URL: http://svn.gna.org/viewcvs/relax?rev=28210&view=rev
Log:
Updated the version number to relax 4.0.2.
Modified:
tags/4.0.2/version.py
Modified: tags/4.0.2/version.py
URL:
http://svn.gna.org/viewcvs/relax/tags/4.0.2/versio
Author: bugman
Date: Thu May 12 11:46:15 2016
New Revision: 28208
URL: http://svn.gna.org/viewcvs/relax?rev=28208&view=rev
Log:
Mac OS X fixes for the Structure.test_pca and Structure.test_pca_observers
system tests.
The eigenvectors on this OS are sometimes inverted. As the sign of the
eigenv
Author: bugman
Date: Thu May 12 10:14:40 2016
New Revision: 28207
URL: http://svn.gna.org/viewcvs/relax?rev=28207&view=rev
Log:
Some more details for the *.eps.gz icon creation process.
Modified:
trunk/graphics/README
Modified: trunk/graphics/README
URL:
http://svn.gna.org/viewcvs/relax/tr
Author: bugman
Date: Thu May 12 10:12:29 2016
New Revision: 28206
URL: http://svn.gna.org/viewcvs/relax?rev=28206&view=rev
Log:
Added some missing oxygen icons to allow the relax manual to compile.
These are the 128x128 EPS versions of the places/folder-development.png and
places/folder-favorites
gui/relax_gui.py Thu May 12 10:04:01 2016
@@ -2,6 +2,7 @@
# #
# Copyright (C) 2009 Michael Bieri#
# Copyright (C) 2010-2016 Edward d'Auvergne
11:13:48 2016
@@ -1,6 +1,6 @@
###
# #
-# Copyright (C) 2003-2015 Edward d'Auvergne #
+# Copyright
Author: bugman
Date: Wed Apr 27 11:08:35 2016
New Revision: 28203
URL: http://svn.gna.org/viewcvs/relax?rev=28203&view=rev
Log:
Simplified the Relax_disp.test_bug_24601_r2eff_missing_data system test.
This is to allow the test to catch bug #24601 to complete in a reasonable time
(2 seconds on on
Author: bugman
Date: Wed Apr 27 08:48:14 2016
New Revision: 28202
URL: http://svn.gna.org/viewcvs/relax?rev=28202&view=rev
Log:
Created a system test for catching bug #24601.
This is the failure of the optimisation of the 'R2eff' dispersion model when
peaks are missing from
one spectrum, as repo
Author: bugman
Date: Wed Apr 20 10:33:29 2016
New Revision: 28201
URL: http://svn.gna.org/viewcvs/relax?rev=28201&view=rev
Log:
Fix for the GUI status bar element widths.
Fixed widths in pixels causes text truncation on many systems, depending on the
width of the main
relax window. Instead vari
yses/frame_order.py Wed Apr 20 10:00:46 2016
@@ -1,6 +1,6 @@
###
# #
-# Copyright (C) 2011-2015 Edward d'Auvergne
016
@@ -1,6 +1,6 @@
###
# #
-# Copyright (C) 2008-2015 Edward d'Auvergne #
+# Copyright (C) 2008-2
Author: bugman
Date: Tue Jan 12 09:41:21 2016
New Revision: 28165
URL: http://svn.gna.org/viewcvs/relax?rev=28165&view=rev
Log:
Added support for concatenating atomic positions in the structure.load_spins
user function.
Together with the spin_num flag set to False, this allows for atomic positio
unk/pipe_control/structure/main.pyTue Jan 12 09:38:10 2016
@@ -1,6 +1,6 @@
###
# #
-# Copyright (C) 2003-2015 E
#
-# Copyright (C) 2010-2015 Edward d'Auvergne #
+# Copyright (C) 2010-2016 Edward d'Auvergne #
# #
# This file is part of the program relax
016
@@ -1,6 +1,6 @@
###
# #
-# Copyright (C) 2003-2015 Edward d'Auvergne #
+# Copyright (C) 2003-2
Jan 11 16:17:34 2016
@@ -1,6 +1,6 @@
###
# #
-# Copyright (C) 2003-2015 Edward d'Auvergne #
+# Copyright
Author: bugman
Date: Mon Jan 11 09:37:45 2016
New Revision: 28160
URL: http://svn.gna.org/viewcvs/relax?rev=28160&view=rev
Log:
Bug fix for the structure.read_pdb user function (bug #24300,
https://gna.org/bugs/?24300).
When the merge flag is True, and both multiple structures and multiple model
Author: bugman
Date: Wed Dec 23 11:21:46 2015
New Revision: 28158
URL: http://svn.gna.org/viewcvs/relax?rev=28158&view=rev
Log:
Added a check for the total argument for the frame_order.distribute user
function.
The maximum value is , as the PDB format cannot accept more models.
Modified:
Author: bugman
Date: Mon Dec 21 11:14:30 2015
New Revision: 28157
URL: http://svn.gna.org/viewcvs/relax?rev=28157&view=rev
Log:
Fix for bug #24218 (https://gna.org/bugs/?24218).
This is the incorrect labelling of alignment tensors by the
align_tensor.matrix_angles user function
when a subset of
Author: bugman
Date: Wed Dec 16 13:45:55 2015
New Revision: 28156
URL: http://svn.gna.org/viewcvs/relax?rev=28156&view=rev
Log:
Update the release checklist document.
The version number at http://wiki.nmr-relax.com/Template:Current_version_relax
also needs to be
updated for each release.
Modif
Author: bugman
Date: Tue Dec 15 14:50:27 2015
New Revision: 28155
URL: http://svn.gna.org/viewcvs/relax?rev=28155&view=rev
Log:
A number of updates for the release checklist document.
This should make it easier to replicate the full release process.
Modified:
trunk/docs/devel/Release_Checkl
Author: bugman
Date: Tue Dec 15 14:37:59 2015
New Revision: 28154
URL: http://svn.gna.org/viewcvs/relax?rev=28154&view=rev
Log:
Added some unicode characters for improved formatting of the CHANGES file.
Modified:
trunk/docs/CHANGES
Modified: trunk/docs/CHANGES
URL:
http://svn.gna.org/viewc
Author: bugman
Date: Tue Dec 15 12:06:54 2015
New Revision: 28152
URL: http://svn.gna.org/viewcvs/relax?rev=28152&view=rev
Log:
Ported r28149 to r28151 from the trunk to improve the HTML manual.
The command used was:
svn log -r28149:r28151 svn+ssh://bug...@svn.gna.org/svn/relax/trunk .
Modified
Author: bugman
Date: Tue Dec 15 12:05:03 2015
New Revision: 28151
URL: http://svn.gna.org/viewcvs/relax?rev=28151&view=rev
Log:
Avoidance of a replicated title in the frame order chapter of the manual.
Modified:
trunk/docs/latex/frame_order/theory.tex
Modified: trunk/docs/latex/frame_order/
Author: bugman
Date: Tue Dec 15 12:01:21 2015
New Revision: 28150
URL: http://svn.gna.org/viewcvs/relax?rev=28150&view=rev
Log:
The replicate title finding script now processes short titles as well.
This shows that the Frame_order.html file will be conflicting and overwritten.
Modified:
tru
Author: bugman
Date: Tue Dec 15 11:51:59 2015
New Revision: 28149
URL: http://svn.gna.org/viewcvs/relax?rev=28149&view=rev
Log:
Improved formatting for the \yes LaTeX command for the HTML manual
(www.nmr-relax.com/manual/).
This now inputs the raw HTML character for a tick.
Modified:
trunk
Author: bugman
Date: Mon Dec 14 17:55:08 2015
New Revision: 28148
URL: http://svn.gna.org/viewcvs/relax?rev=28148&view=rev
Log:
Updated the relax version number to 4.0.1 on the
http://www.nmr-relax.com/api/index.html webpage.
Modified:
website/api/index.html
Modified: website/api/index.htm
Author: bugman
Date: Mon Dec 14 17:14:37 2015
New Revision: 28147
URL: http://svn.gna.org/viewcvs/relax?rev=28147&view=rev
Log:
Updated the relax API documentation at http://www.nmr-relax.com/api/4.0/ to
version 4.0.1.
Added:
website/api/4.0/docs.latex.find_replicate_titles-module.html
Author: bugman
Date: Mon Dec 14 16:59:24 2015
New Revision: 28146
URL: http://svn.gna.org/viewcvs/relax?rev=28146&view=rev
Log:
Updated the relax HTML manual at http://www.nmr-relax.com/manual/index.html to
version 4.0.1.
Added:
website/manual/structure_pca.html
Modified:
website/manual
Author: bugman
Date: Mon Dec 14 16:35:17 2015
New Revision: 28145
URL: http://svn.gna.org/viewcvs/relax?rev=28145&view=rev
Log:
Updated the http://www.nmr-relax.com/download.html webpage for the relax 4.0.1
release.
Modified:
website/download.html
[This mail would be too long, it was short
Author: bugman
Date: Mon Dec 14 14:40:24 2015
New Revision: 28144
URL: http://svn.gna.org/viewcvs/relax?rev=28144&view=rev
Log:
Backported the relax 4.0.1 CHANGES file changes to trunk.
The command used was:
svn merge -r28142:28143 svn+ssh://bug...@svn.gna.org/svn/relax/tags/4.0.1 .
Modified:
Author: bugman
Date: Mon Dec 14 14:39:06 2015
New Revision: 28143
URL: http://svn.gna.org/viewcvs/relax?rev=28143&view=rev
Log:
Updated the CHANGES file for relax 4.0.1.
Modified:
tags/4.0.1/docs/CHANGES
[This mail would be too long, it was shortened to contain the URLs only.]
Modified: ta
Author: bugman
Date: Mon Dec 14 11:53:53 2015
New Revision: 28142
URL: http://svn.gna.org/viewcvs/relax?rev=28142&view=rev
Log:
Added the relax 4.0.1 PDF manual to the repository.
Added:
tags/4.0.1/docs/relax.pdf (with props)
Added: tags/4.0.1/docs/relax.pdf
URL:
http://svn.gna.org/viewc
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