[sage-devel] Re: does zn_poly normally take a long time to build?

2008-07-16 Thread mabshoff
On Jul 16, 8:39 pm, tkeller [EMAIL PROTECTED] wrote: Hi, The last build I built from source (3.0.3) took ~ 3 hours total on my average dell laptop  (running kubuntu 8.0.4.1).  Building 3.0.5 is ongoing, but has spent the last 5+ hours on zn_poly tuning program. Is this normal?  It hasn't

[sage-devel] Sage 3.0.6.alpha0 released

2008-07-16 Thread mabshoff
(I am leaving for ECM in about an hour), but expect steady progress on that front in 3.0.6. As usual please review patches and spkgs since we have a boatload of them sitting in trac. Sources and a binary for sage.math are in the usual place: http://sage.math.washington.edu/home/mabshoff/release

[sage-devel] Re: does zn_poly normally take a long time to build?

2008-07-16 Thread mabshoff
On Jul 16, 8:54 pm, tkeller [EMAIL PROTECTED] wrote: Hi Thomas, I may have been imprecise. To clarify, zn_poly built, then displayed this message: Calibrating cycle counter... ok (3.84e+18) KS mul: ... KS sqr: ... Nussbaumer mul:

[sage-devel] Re: Sage 3.0.5/3.0.6.alpha0: doctest failure in ssmod.py

2008-07-17 Thread mabshoff
Ok, here is what I found out last night: * 3.0.3 runs the test 200 times without failing it once * 3.0.4 with the new FLINT 1.0.13 fails 8 ought of 500 tests. So we are given a couple possibilities: * There is an algorithmic issue in ssmod somewhere or some algorithmic issue got exposed

[sage-devel] Re: Sage 3.0.5/3.0.6.alpha0: doctest failure in ssmod.py

2008-07-18 Thread mabshoff
On Jul 17, 10:34 pm, mabshoff [EMAIL PROTECTED] wrote: Ok, here is what I found out last night:  * 3.0.3 runs the test 200 times without failing it once  * 3.0.4 with the new FLINT 1.0.13 fails 8 ought of 500 tests. So we are given a couple possibilities:  * There is an algorithmic

[sage-devel] Re: Sage 3.0.6.alpha0 released

2008-07-18 Thread mabshoff
On Jul 18, 1:01 am, John Cremona [EMAIL PROTECTED] wrote: Hi John, Following Ansrzej's report I tried the same thing.  For me the test always takes 2.0-2.1s but the 5th or 6th time I got the failure: sage -t  devel/sage/sage/modular/ssmod/ssmod.py

[sage-devel] Sagemath.org mirrors

2008-07-18 Thread mabshoff
Hello folks, we finally have working mirrors again, but since we moved a lot of files around most mirrors not sage.math are still catching up since they all have to mirror 28GB. Be patient and everything should be back to normal in a day or two. Apologies for breaking the mirrors, I hope it

[sage-devel] [Fwd: [atlas-devel] ATLAS 3.9.0 LAPACK]

2008-07-18 Thread mabshoff
Hi, the following might be interesting for some people around here. As time permits I will offer an optional spkg. Cheers, Michael Original Message Subject: [atlas-devel] ATLAS 3.9.0 LAPACK Date: Fri, 18 Jul 2008 06:19:10 -0500 From: Clint Whaley [EMAIL PROTECTED] Reply-To:

[sage-devel] Re: Sage 3.0.5/3.0.6.alpha0: doctest failure in ssmod.py

2008-07-18 Thread mabshoff
mod p? Some data points: I could never get valgrind to detect any problem with ssmod.py, but since it took about 2200 seconds in sage.math for one round that is not so surprising since the sample set was so small. Cheers Clement Cheers, Michael mabshoff a écrit : On Jul 17, 10:34 pm

[sage-devel] Re: sagemath.org website info #2

2008-07-18 Thread mabshoff
On Jul 18, 12:33 pm, Harald Schilly [EMAIL PROTECTED] wrote: Hi Harald, Hello Sage folks, as promised in my last website posting [1], here a bit more how things evolved. nice work and thanks for your continued efforts. First, since there is some tracking going on, and I have a bit more

[sage-devel] Re: Sage 3.0.5/3.0.6.alpha0: doctest failure in ssmod.py

2008-07-18 Thread mabshoff
On Jul 18, 3:59 pm, Clement Pernet [EMAIL PROTECTED] wrote: snip I have applied the patch and rebuild LinBox and started running the test 500 times to see. Can you guess if/how much this patch does affect performance for charpoly mod p? For the dimensions you are considering (and up to a

[sage-devel] Re: Coercion merge, 3.0.6, 3.1 and 3.1.1

2008-07-19 Thread mabshoff
On Jul 19, 8:16 am, Jason Grout [EMAIL PROTECTED] wrote: mabshoff wrote: Hello folks, due to the ssmod and the gfe2 bug in Sage we really want to have a stable release out by Wednesday when William gives his talk at ISSAC. Since we don't want to cut it too short that means that I just

[sage-devel] Re: Coercion merge, 3.0.6, 3.1 and 3.1.1

2008-07-19 Thread mabshoff
On Jul 19, 7:24 am, John Cremona [EMAIL PROTECTED] wrote: When you say Any new ticket should be a real blocker I presume you only actually mean tickets asking for resolution before 3.1.1?   I recently created a new ticket which  can certainly wait until 3.1.1 (it's not even a bug, but a new

[sage-devel] Re: Suggestion components to add onto SAGE

2008-07-19 Thread mabshoff
On Jul 19, 3:39 pm, David Joyner [EMAIL PROTECTED] wrote: On Sat, Jul 19, 2008 at 6:10 PM, q10 [EMAIL PROTECTED] wrote: Hello: It has come to my attention that SAGE does not have a units-conversion program component (maybe it has; if it does, please show me).  I recommend adding the

[sage-devel] Re: Coercion merge, 3.0.6, 3.1 and 3.1.1

2008-07-20 Thread mabshoff
On Jul 20, 12:20 am, Robert Bradshaw [EMAIL PROTECTED] wrote: On Jul 19, 2008, at 7:09 AM, mabshoff wrote: Hello folks, Hi, due to the ssmod and the gfe2 bug in Sage we really want to have a stable release out by Wednesday when William gives his talk at ISSAC. Since we don't want

[sage-devel] Re: Sage 3.0.6.alpha0 released

2008-07-20 Thread mabshoff
On Jul 19, 10:01 am, Andrzej Giniewicz [EMAIL PROTECTED] wrote: Hi, after some sniffing around, I noticed that for me (see bottom of mail for gcc version) techyon needs to be compiled with make linux (with disabled threads) or with -fno-crossjumping -fno-reorder-blocks added to Make-arch

[sage-devel] Re: sage + py.test fails

2008-07-20 Thread mabshoff
On Jul 20, 8:20 am, Ondrej Certik [EMAIL PROTECTED] wrote: On Sun, Jul 20, 2008 at 4:48 PM, William Stein [EMAIL PROTECTED] wrote: Hi, SNIP BTW, here is another creepy thing, that maybe is a bug in Sage: $ gedit gedit: symbol lookup error: /usr/lib/libxml2.so.2: undefined symbol: gzopen64

[sage-devel] Re: CUDA and Sage

2008-07-20 Thread mabshoff
On Jul 20, 9:21 am, Simon Beaumont [EMAIL PROTECTED] wrote: Hi Simon, I am just about to embark on integrating come CUDA libraries into sage. I was not sure of the best route to go - I am considering the pycuda libraries as a starting point - this a pure kernel approach - I but would also

[sage-devel] Re: sagemath.org website info #2

2008-07-20 Thread mabshoff
On Jul 20, 9:43 am, Dr. David Kirkby [EMAIL PROTECTED] wrote: On Jul 20, 10:03 am, mabshoff [EMAIL PROTECTED] wrote: Hi David, Ok, we had some discussions off list about Solaris support in general and back then the possibility of setting up a Sparc with Solaris 8 came up, so I could

[sage-devel] Re: sagemath.org website info #2

2008-07-20 Thread mabshoff
On Jul 19, 11:53 pm, Dr. David Kirkby [EMAIL PROTECTED] wrote: On Jul 19, 11:38 pm, mabshoff [EMAIL PROTECTED] wrote: Hi, On Jul 19, 2:45 am, Dr. David Kirkby [EMAIL PROTECTED] wrote: On 18 Jul, 20:33, Harald Schilly [EMAIL PROTECTED] wrote: SNIP 12) Once a Solaris port

[sage-devel] Re: sage + py.test fails

2008-07-20 Thread mabshoff
On Jul 20, 11:20 am, Ondrej Certik [EMAIL PROTECTED] wrote: On Sun, Jul 20, 2008 at 6:38 PM, mabshoff [EMAIL PROTECTED] wrote: SNIP Hi Ondrej, But even then it will only be a question of time until something else blows up. That is why I strictly refuse to support Sage being used

[sage-devel] Re: Package management and versioning

2008-07-20 Thread mabshoff
On Jul 20, 3:27 pm, William Stein [EMAIL PROTECTED] wrote: On Sun, Jul 20, 2008 at 11:59 PM, mabshoff [EMAIL PROTECTED] wrote: On Jul 20, 2:39 pm, [EMAIL PROTECTED] [EMAIL PROTECTED] wrote: Hi folks, Hi Vincent, Looking at the way that sage builds and installs its packages, I

[sage-devel] Re: Package management and versioning

2008-07-20 Thread mabshoff
On Jul 20, 2:39 pm, [EMAIL PROTECTED] [EMAIL PROTECTED] wrote: Hi folks, Hi Vincent, Looking at the way that sage builds and installs its packages, I didn't see an easy way to remove an optional package (say in case it breaks something, or you don't need it anymore) ; has it been

[sage-devel] Re: Trivial problems in the sage 3.0.5 distribution

2008-07-20 Thread mabshoff
On Jul 20, 9:13 pm, Timothy G Abbott [EMAIL PROTECTED] wrote: Hi Tim, Below I list a large number of trivial problems in the Sage 3.0.5 distribution tarball that the Debian automatic package checking tools detected. None of the problems below have any functional effect, they're just things

[sage-devel] Re: Package management and versioning

2008-07-21 Thread mabshoff
On Jul 20, 4:21 pm, [EMAIL PROTECTED] [EMAIL PROTECTED] wrote: Hi, OK, so who knows a clever way to detect which files were added/changed in a directory structure? Quick and very dirty : 'find . -cmin -5' (files modified less than 5 minutes ago). Not even close :). There are packages

[sage-devel] Re: Sage 3.0.6.alpha0 released

2008-07-21 Thread mabshoff
On Jul 21, 1:35 pm, Andrzej Giniewicz [EMAIL PROTECTED] wrote: Hi, Hi Andrzej, some new informations, gcc 4.2.4 is also affected by this, but all gcc = 4.2.3 are for sure working right, for 4.2.4 and 4.3.1 tachyon segfaults, I'm looking for some live cd with gcc 4.3 to see if problem is

[sage-devel] Sage 3.0.6.rc0 released

2008-07-21 Thread mabshoff
Hello folks, this is 3.0.6.rc0 which should be the last release before the ISSAC 2008 special 3.0.6 release for Wednesday. We fixed a bunch of issues and were a little less conservative than I though, but what could go wrong ;) Sources are at http://sage.math.washington.edu/home/mabshoff

[sage-devel] Re: Trivial problems in the sage 3.0.5 distribution

2008-07-21 Thread mabshoff
Thanks Tim for opening the tickets. For the record those are #3686 - $3690. Cheers, Michael --~--~-~--~~~---~--~~ To post to this group, send email to sage-devel@googlegroups.com To unsubscribe from this group, send email to [EMAIL PROTECTED] For more options,

[sage-devel] Re: CUDA and Sage

2008-07-22 Thread mabshoff
On Jul 22, 1:29 am, Thierry Dumont [EMAIL PROTECTED] wrote: Francesco Biscani a écrit : With the non-header-only Boost libraries (such as Boost.Python), a possible approach could be that of modifying the build system of a package that uses them to compile and link the needed Boost

[sage-devel] Re: Package management and versioning

2008-07-22 Thread mabshoff
On Jul 21, 6:18 am, [EMAIL PROTECTED] [EMAIL PROTECTED] wrote: Hi Vincent, Quick and very dirty : 'find . -cmin -5' (files modified less than 5 minutes ago). Not even close :). There are packages that install in less than 10 seconds. That one was a joke, of course. I have used it

[sage-devel] Re: periods.cc:593: error: call of overloaded `log(int)' is ambiguous

2008-07-22 Thread mabshoff
On Jul 22, 6:07 am, karakas [EMAIL PROTECTED] wrote: Hi, Here is part of install.log (I have set over more or less sensitive, or boring information): GCC Version gcc -v Reading specs from /usr/lib/gcc-lib/i586-suse-linux/3.3.5/specs Configured with: ../configure

[sage-devel] Re: Status of Sage for Debian

2008-07-22 Thread mabshoff
On Jul 21, 7:44 pm, Timothy G Abbott [EMAIL PROTECTED] wrote: Hi Tim, I figured I'd give everyone an update on how things are going with the Sage packages.  I believe (but am not certain) that all of the Sage dependencies that I want to get into Lenny will make it, though I'm still waiting

[sage-devel] Re: why sage is useful for me

2008-07-22 Thread mabshoff
, python, ATLAS, numpy 1.1.1, scipy SVN and hg if you left me know the CPU target you want. I have to offer Sparc US IIIi, Core2 Quad SSE or Opteron. So, mabshoff -- Solaris port +1. Me too wanting that. 3.0.6 contains about five Solaris build fixes, so the list is getting shorter. We mainly did

[sage-devel] Re: periods.cc:593: error: call of overloaded `log(int)' is ambiguous

2008-07-22 Thread mabshoff
On Jul 22, 8:12 am, mabshoff [EMAIL PROTECTED] wrote: On Jul 22, 6:07 am, karakas [EMAIL PROTECTED] wrote: Hi, Here is part of install.log (I have set over more or less sensitive, or boring information): GCC Version gcc -v Reading specs from /usr/lib/gcc-lib/i586-suse

[sage-devel] Re: pari slowness

2008-07-22 Thread mabshoff
On Jul 22, 11:48 am, David Harvey [EMAIL PROTECTED] wrote: On Jul 22, 2008, at 12:35 PM, David Harvey wrote: SNIP This seems to have been fixed already in 3.0.5. Sorry for the noise. david Hi David, we reverted to the old gmp 4.2.1 spkg in 3.0.5 since the only reason to upgrade was to

[sage-devel] Re: CUDA and Sage

2008-07-22 Thread mabshoff
On Jul 22, 2:55 pm, Simon Beaumont [EMAIL PROTECTED] wrote: Hi Simon, I decided to have a play with the pycuda-0.90.2 kit for which I needed boost_1_35_0 Mhh, is 1.35.0 mandatory? We might have to upgrade boost in PolyBoRi then. - the main caveat is to make sure boost is using the sage

[sage-devel] Re: Sage-3.0.5 Solaris-x86-sse3 binary

2008-07-22 Thread mabshoff
On Jul 22, 10:17 am, [EMAIL PROTECTED] [EMAIL PROTECTED] wrote: Hi Brandon Speaking of Matlab, I was able to get version r2008a (most recent version) working in a linux-2.6 zone using the CentOS 5 distribution. I then installed RPyC 3.00 RC1 (http://rpyc.wikispaces.com/) Interesting, I had

[sage-devel] Re: periods.cc:593: error: call of overloaded `log(int)' is ambiguous

2008-07-23 Thread mabshoff
On Jul 22, 10:18 am, karakas [EMAIL PROTECTED] wrote: Hi Chris, Thank you very much for the clear and fast answer. Since upgrading gcc will probably mean an upgrading of glibc too, which will mean a recompilation/upgrade of the whole system, gcc 3.4.6 or 4.0.2 (or is .3 the last one?) will

[sage-devel] Re: Problems in HGCD patch

2008-07-25 Thread mabshoff
On Jul 24, 12:11 pm, Bill Hart [EMAIL PROTECTED] wrote: Then again if that is so, it is recorded here incorrectly: http://sagemath.org/packages/standard/ Then again I think SAGE uses FLINT 1.0.13 by now, so that's not up-to- date either. Bill. The FLINT upgrade is in 3.0.6.rc0, so it

[sage-devel] Re: libpng.dylib on OSX

2008-07-25 Thread mabshoff
On Jul 25, 5:11 am, Martin Albrecht [EMAIL PROTECTED] wrote: Hi there, Hi Martin, my patch at  http://trac.sagemath.org/sage_trac/ticket/3324 is held back by a libPNG problem on OSX, particulary the spkg-install contains the following code: if [ `uname` = Darwin -a $SAGE64 = yes ];

[sage-devel] Sage Doc Day 3 (July 27th, 2008)

2008-07-25 Thread mabshoff
Hi folks, after a long, long time we want to do another Doc Day this Sunday. William won't be around, but that should not stop us. The goal should be to review patches and also write a bunch of new doctests since one of the goals this year is to get up to 100% doctests this year. Thoughts?

[sage-devel] Re: initial giac spkg

2008-08-18 Thread mabshoff
On Aug 18, 10:37 am, Ondrej Certik [EMAIL PROTECTED] wrote: On Mon, Aug 18, 2008 at 7:29 PM, Martin Albrecht Hi, [EMAIL PROTECTED] wrote: Ah I see thanks. I used some other spkg package as a template. Which one? It needs to be fixed :-) Yes :) Well, some unofficial one:

[sage-devel] Re: Sage Package Vote: Hidden Markov Models into Sage?

2008-08-18 Thread mabshoff
An appropriate amount of time has passed and I consider this a positive vote for the inclusion of GHMM into Sage. Cheers, Michael --~--~-~--~~~---~--~~ To post to this group, send email to sage-devel@googlegroups.com To unsubscribe from this group, send email to

[sage-devel] Re: sage-3.1.1 : Gnutls compilation failure

2008-08-19 Thread mabshoff
On Aug 18, 1:20 pm, bourbabis [EMAIL PROTECTED] wrote: Hello everybody. Everything is in the title. The install log : http://download69.mediafire.com/fzzdvb2dymmg/mykrpj3thu6/install.log.bz2 Thanks. Hi, this is the same problem as you reported last time. For some reason some part of

[sage-devel] Re: Sage 3.1.final is out

2008-08-19 Thread mabshoff
On Aug 19, 12:12 am, Stan Schymanski [EMAIL PROTECTED] wrote: Hi Stan, As mentioned before, the sage -upgrade from sage 3.0.5 did not work for me, but a fresh compilation of the sage-3.1.1.tar into a new directory worked fine on my PowerBook Pro 2.4 GHz with os 10.4.11. I am trying it out

[sage-devel] Bug Day 13: August 23rd, 2008

2008-08-19 Thread mabshoff
Hello folks, I would like to suggest a Buh Day for this Saturday, August 23rd, 2008. We will start at 10 am PST and go on until the last person is exhausted. If you plan to participate please add youself to http://wiki.sagemath.org/bug13 Cheers, Michael

[sage-devel] Re: Sage 3.1.final is out

2008-08-20 Thread mabshoff
On Aug 20, 7:40 am, Dr. David Kirkby [EMAIL PROTECTED] wrote: On 16 Aug, 23:18, mabshoff [EMAIL PROTECTED] Please build and test, a final source release should be out tonight. Hi Dave I thought the Solaris specific fixes were planned for 3.1, but I see polybori-0.3.1.p4 still fails

[sage-devel] Re: Sage 3.1.final is out

2008-08-22 Thread mabshoff
On Aug 21, 9:44 pm, Dr. David Kirkby [EMAIL PROTECTED] wrote: SNIP Yeah, unfortunately loads of things got bumped from the 3.1 release due to time constraints and Sage Days 9 also did not help too much. I am merging build fixes into 3.1.2 and so far have mostly done 64 bit OSX fixes.

[sage-devel] Re: Problem building sage 3.1 on Debian lenny amd 64

2008-08-25 Thread mabshoff
On Aug 25, 1:45 am, Thierry Dumont [EMAIL PROTECTED] wrote: Hi, Hi, I try to compile sage on my opteron machine. When compiling flint, I get the ld error message: /usr/bin/ld: cannot find -lstdc++ Th ld lines are: g++  -I/usr/local/sage-3.1/local/include/

[sage-devel] Re: Proposal for inclusion of GINAC/pynac-0.1 in Sage.

2008-08-26 Thread mabshoff
+1 from me to include Pynac/GiNaC in Sage, Martin Albrecht asked about the Windows porting issue: I looked at the GiNaC code and it is very clean C++. The maintainer is willing to merge MSVC related patches where needed, i.e. export statements for the symbols we need. I am not aware of any other

[sage-devel] Re: Manipulating diff. eqs. in Mathematica using pattern matching

2008-08-26 Thread mabshoff
On Aug 25, 11:50 pm, Ondrej Certik [EMAIL PROTECTED] wrote: Hi, I think it's just about getting people to fix it. There are many people around who can fix Python/Cython and a little less (I guess) who can fix C++ and C. But a lot less who can fix lisp. As I mentioned before, another

[sage-devel] Re: Manipulating diff. eqs. in Mathematica using pattern matching

2008-08-26 Thread mabshoff
On Aug 26, 12:34 am, Ondrej Certik [EMAIL PROTECTED] wrote: Hi, Well, Sage developers like Python, Cython and C while Maxima developers like lisp (at least for the low level stuff) - so we are having self selecting groups here. It is the best tool for the job, but also the devil you

[sage-devel] Re: Proposal for inclusion of GINAC/pynac-0.1 in Sage.

2008-08-26 Thread mabshoff
On Aug 26, 1:27 am, William Stein [EMAIL PROTECTED] wrote: On Tue, Aug 26, 2008 at 1:19 AM, Ondrej Certik [EMAIL PROTECTED] wrote: SNIP qepcad relies on an aging library saclib for the algebraic data structures. It would be a worthwhile project to implement CAD/port qepcad so that it

[sage-devel] Re: Testing the Notebook using Selenium

2008-08-26 Thread mabshoff
On Aug 23, 11:04 am, Mike Hansen [EMAIL PROTECTED] wrote: Hello all, Hi Mike, While we continue to add tests to the notebook code,  there are some things that we just can't test directly in Python such as browser interactions / Javascript / etc.  Luckily, there is a nice software package

[sage-devel] Vote for new spkg

2008-08-27 Thread mabshoff
Hi, at #258 Pablo De Napoli has posted an spkg for gp2c. It is tiny (about 500kb) and is considered useful by many people. It is a tool to translated pari code to C code that in turn can be linked to the pari library. Since that is a rather old ticket that has been sitting around it is now

[sage-devel] Sage 3.1.2.alpha1 released

2008-08-27 Thread mabshoff
will see in the morning what blew up :) Sources are available in http://sage.math.washington.edu/home/mabshoff/release-cycles-3.1.2/ Cheers, Michael Merged in Sage 3.1.alpha1: #1539: William Stein: bdist of sage should include devel/doc [Reviewed by Michael Abshoff] #2000: Martin Albrecht

[sage-devel] Cleanup of sage.math home directories

2008-08-27 Thread mabshoff
Hello folks, space is getting right again on sage.math's home partition. I will post a list with the hard drive space consumption winner later on today (PST), so this is a possibility to clean up before I post the list of winners :) Cheers, Michael

[sage-devel] Re: Sage 3.1.2.alpha1 released

2008-08-27 Thread mabshoff
In general note that #3813 (the new adaptive plotting code) slows down a lot of doctests since we end up creating plots with a lot more points, but much better quality. Mike Hansen has an idea how to fix that performance issue, but there is no ticket yet. Even with his _fast_float fixes the slow

[sage-devel] Re: Sage 3.1.2.alpha1 released

2008-08-27 Thread mabshoff
On Aug 27, 12:32 pm, William Stein [EMAIL PROTECTED] wrote: On Wed, Aug 27, 2008 at 5:42 AM, mabshoff [EMAIL PROTECTED] wrote: SNIP It fails to build for silly reasons on iras and cleo (our itaniums): checking target system type... ia64-unknown-linux-gnu checking for a BSD-compatible

[sage-devel] Re: Edit a copy does not work on published worksheet

2008-08-27 Thread mabshoff
On Aug 27, 2:23 pm, Igor Tolkov [EMAIL PROTECTED] wrote: I prefer Google Docs, since I don't know the wiki code very well. I think, the most logical approach is to enumerate most of the notebook functionality, as well as notebook-related bugs that are open or have been closed in recent

[sage-devel] Re: Sage 3.1.2.alpha1 released

2008-08-27 Thread mabshoff
On Aug 27, 9:56 pm, Arnaud Bergeron [EMAIL PROTECTED] wrote: 2008/8/27 John Cremona [EMAIL PROTECTED]: Hi Arnaud, Since this bugged me (I did the adaptive rendering thing) I timed the doctests for plot.py on my machine: sage 3.1.1 vanilla sage -t  devel/sage-main/sage/plot/plot.py      

[sage-devel] Re: Sage 3.1.2.alpha1 released

2008-08-27 Thread mabshoff
On Aug 27, 8:57 am, John Cremona [EMAIL PROTECTED] wrote: Two build reports.  Both built fine, but a few doctest failures: Hi John, 1.  Linux version 2.6.24-19-generic ([EMAIL PROTECTED]) (gcc version 4.2.3 (Ubuntu 4.2.3-2ubuntu7)) #1 SMP Fri Jul 11 23:41:49 UTC 2008 The following tests

[sage-devel] Re: bad URL to benchmark for graph theory project

2008-08-28 Thread mabshoff
On Aug 27, 11:12 pm, Minh Nguyen [EMAIL PROTECTED] wrote: SNIP Hi Minh, I'm assuming that the correct benchmark URL is http://www.sagemath.org:9001/graph_benchmark Is this correct? Yes, at some point the wiki moved to its own domain and then the domain was moved to a different host.

[sage-devel] Re: bad URL to benchmark for graph theory project

2008-08-28 Thread mabshoff
On Aug 27, 11:35 pm, Minh Nguyen [EMAIL PROTECTED] wrote: Hi Michael, On Thu, Aug 28, 2008 at 6:24 AM, mabshoff [EMAIL PROTECTED] wrote: [...] Yes, at some point the wiki moved to its own domain and then the domain was moved to a different host. All sage.math:9001 urls should now

[sage-devel] Re: Sage 3.1.2.alpha1 released

2008-08-28 Thread mabshoff
On Aug 28, 4:59 am, Ondrej Certik [EMAIL PROTECTED] wrote: On Thu, Aug 28, 2008 at 1:33 PM, David Joyner [EMAIL PROTECTED] wrote: SNIP Hi, -- The following tests failed:        sage -t  

[sage-devel] Reviews, Reviews, Reviews for 3.1.2 ...

2008-08-28 Thread mabshoff
Hello folks, fortunately the number of ticket with unreviewed patches has dropped from 100+ to around 40 at the moment. But if you look at http://trac.sagemath.org/sage_trac/report/10 there are still 41 open tickets with patches waiting for review. So if you have some spare cycles to burn

[sage-devel] Re: Sage 3.1.2.alpha1 released

2008-08-28 Thread mabshoff
On Aug 28, 5:17 am, Ondrej Certik [EMAIL PROTECTED] wrote: Trying:     G.show(frame_aspect_ratio=[Integer(1),Integer(1),Integer(1)/Integer(2)])### line 893:_sage_     G.show(frame_aspect_ratio=[1,1,1/2]) Expecting nothing after maybe a minute. Imho 1 minute for one test is way

[sage-devel] Re: Sage 3.1.2.alpha1 released

2008-08-28 Thread mabshoff
On Aug 28, 9:24 am, Arnaud Bergeron [EMAIL PROTECTED] wrote: 2008/8/28 mabshoff [EMAIL PROTECTED]: Hi Arnaud, Thanks for tracking this down. Please open a new ticket and attach the patch to it. We generally attempt to avoid reopening tickets or adding patches to tickets that were

[sage-devel] Re: Sage 3.1.2.alpha1 released

2008-08-28 Thread mabshoff
On Aug 28, 6:30 am, William Stein [EMAIL PROTECTED] wrote: On Wed, Aug 27, 2008 at 10:22 PM, mabshoff [EMAIL PROTECTED] wrote: SNIP Yeah, the above looks odd. Maybe William can tell us what is happening here. I think the above is just numerical noise.  The Viterbi algorithm

[sage-devel] Re: Command line processing sage-python

2008-08-28 Thread mabshoff
On Aug 28, 2:32 pm, William Stein [EMAIL PROTECTED] wrote: On Thu, Aug 28, 2008 at 1:19 PM, Simon Beaumont [EMAIL PROTECTED] wrote: Hi, got a rather weird one - os x 10.5.2 sage 3.1.1 (binary build) I am trying to build boost (python) for this version on os x - so I can get pycuda

[sage-devel] Re: Sage 3.1.2.alpha1 released

2008-08-28 Thread mabshoff
On Aug 28, 1:18 pm, Jaap Spies [EMAIL PROTECTED] wrote: mabshoff wrote: On Aug 28, 9:18 am, Jaap Spies [EMAIL PROTECTED] wrote: Hi Jaap, I guess sailing season this year is coming to an end :) Not yet! I'll go on until the end of October. BUt there have been some problems

[sage-devel] Re: python binding for nauty in optional spkg

2008-08-28 Thread mabshoff
On Aug 28, 1:20 pm, Stephen Hartke [EMAIL PROTECTED] wrote: Hi Stephen, I've added my Python binding for nauty into Jason Grout's optional nauty spkg. (Jason: I hope that's okay.  Since the extension needs to include nauty and link against it, it seems simplest to include it in one package.)

[sage-devel] Re: python binding for nauty in optional spkg

2008-08-28 Thread mabshoff
two separate compilings be done? Others (mabshoff?) can comment on what to do about -fPIC.  However, my guess is that using sed at spkg install time is probably not a good idea, or at least not in line with official practices.  It seems that the official way to change the makefile is to store

[sage-devel] Doc Day 3: Saturday August 30th, 2008

2008-08-28 Thread mabshoff
Hello folks, September 1st is around the corner and we wanted to hit 60% coverage by the end of August. The current coverage in my alpha2 merge tree is Overall weighted coverage score: 57.2% Total number of functions: 20912 and Mike Hansen is writing doctests for all the expect

[sage-devel] Re: Additive Groups

2008-08-29 Thread mabshoff
On Aug 29, 2:24 am, Nils Skoruppa [EMAIL PROTECTED] wrote: SNIP Hi Nils, I cannot explain why this works, but if you want to have a look:http://hg.countnumber.de/fqm-devel/file/98bb736f0c07/cn_group/finite_... (and then  line  2132  class

[sage-devel] Sage 3.1.2.alpha2 released

2008-08-29 Thread mabshoff
(unless we remove some dead code), so this is certainly an ambitious goal. Sources are at http://sage.math.washington.edu/home/mabshoff/release-cycles-3.1.2/sage-3.1.2.alpha2.tar and a sage.math only binary is at http://sage.math.washington.edu/home/mabshoff/release-cycles-3.1.2/sage-3.1.2

[sage-devel] Re: colours in trac

2008-08-29 Thread mabshoff
On Aug 29, 3:58 am, John Cremona [EMAIL PROTECTED] wrote: 2008/8/29 chris wuthrich [EMAIL PROTECTED]: Hi, I wonder if a user can change the colours on the trac pages for patches. Being green-red colour-blind, I would prefer to swap, say, green for blue. +1 from another red-green

[sage-devel] Re: Sage 3.1.2.alpha2 released

2008-08-29 Thread mabshoff
On Aug 29, 7:09 am, John Cremona [EMAIL PROTECTED] wrote: Build reports for 3.1.2.alpha2 Hi John, 32-bit still running 64-bit on Linux version 2.6.18.8-0.3-default ([EMAIL PROTECTED]) (gcc version 4.1.2 20061115 (prerelease) (SUSE Linux)) #1 SMP Tue Apr 17 08:42:35 UTC 2007 Build ok,

[sage-devel] Re: Sage 3.1.2.alpha2 released

2008-08-29 Thread mabshoff
On Aug 29, 10:16 am, John Cremona [EMAIL PROTECTED] wrote: 2008/8/29 mabshoff [EMAIL PROTECTED]: Hi John, Thanks for testing - let's hope 32 bit goes well, too. The following tests failed:         sage -t  devel/sage/sage/stats/hmm/chmm.pyx         sage -t  devel/sage/sage/stats/hmm

[sage-devel] Re: virtual box

2008-08-29 Thread mabshoff
On Aug 29, 12:31 pm, bnewbold [EMAIL PROTECTED] wrote: Hi, I got pretty frustrated setting up vmware (workstation, have a license through school) under Ubuntu linux for the purpose of building a FreeBSD development image; lots of license issues, networking was a pain to configure, and

[sage-devel] Re: Sage on french TV

2008-08-29 Thread mabshoff
On Aug 29, 2:34 pm, Jaap Spies [EMAIL PROTECTED] wrote: Philippe Saade wrote: Hi dev team, Some of you know that wednesday and thursday i made an official presentation of Sage at the Maths' Teachers' Summer School (French Educational System). Notebook ended up on TV (well 3

[sage-devel] Re: reopening Sage - Blender discussion

2008-08-29 Thread mabshoff
On Aug 29, 4:52 pm, Carl Witty [EMAIL PROTECTED] wrote: On Aug 29, 4:36 pm, Philippe Saade [EMAIL PROTECTED] wrote: Hi, Hi, after many discussion with Sage potential users (this week, around me), i get convinced that it would be great to use Blender Python APi to rendre 3D scenes

[sage-devel] Re: Doc Day 3: Saturday August 30th, 2008

2008-08-29 Thread mabshoff
On Aug 28, 3:43 pm, mabshoff [EMAIL PROTECTED] wrote: Hello folks, September 1st is around the corner and we wanted to hit 60% coverage by the end of August. The current coverage in my alpha2 merge tree is   Overall weighted coverage score:  57.2%   Total number of functions:  20912

[sage-devel] Re: Doc Day 3: Saturday August 30th, 2008

2008-08-29 Thread mabshoff
On Aug 29, 7:42 pm, Martin Albrecht [EMAIL PROTECTED] wrote: Hi there, Hi Martin, I've got a couple of questions about Doc Day 3. Who is attending? There doesn't seem to be Wiki page for it. At least William, Mike Hansen, rlm and me will meet physically in Seattle. We will probably do a

[sage-devel] Re: Error installing pynac

2008-08-29 Thread mabshoff
On Aug 29, 7:57 pm, Jason Merrill [EMAIL PROTECTED] wrote: Hi Jason, I tried to install pynac on OS X 10.5, but it died.  Here's an excerpt of install.log pynac-0.1 Machine: Darwin jmerrill.local 9.4.0 Darwin Kernel Version 9.4.0: Mon Jun  9 19:30:53 PDT 2008;

[sage-devel] Re: Vote for new spkg: gp2c

2008-08-29 Thread mabshoff
Hi, I guess due to lack of interest we will make gp2c an optinal.spkg. I need to investigate how that works out, but since I want to upgrade pari anyway to the latest release I can integrate those changes needed for gp2c in its spkg-install. Cheers, Michael

[sage-devel] Re: Sage 3.1.2.alpha2 released

2008-08-30 Thread mabshoff
On Aug 30, 2:36 am, Jaap Spies [EMAIL PROTECTED] wrote: mabshoff wrote: SNIP Hi Jaap, Where have I seen this before? the same issue hit your box before and we ended up filtering some non- ascii characters out of the stream. I will dig for the ticket and see what is turning up. Jaap

[sage-devel] #4006: Remove unused code in sage/libs/pari/functional.py

2008-08-30 Thread mabshoff
Hi, while looking for code to doctest Mike Hansen came across sage/libs/ pari/functional.py It is a file with 191 one line functions that attempt to do things like the following: def FOO(x): return pari(x).FOO() There is no user of the code, the only file that imports it is bg.py which is

[sage-devel] Re: colours in trac

2008-08-30 Thread mabshoff
Hi Chris, Mike Hansen and I changed the green to blue in the diff view for patches. Could you let us know if this is better for you? Cheers, Michael --~--~-~--~~~---~--~~ To post to this group, send email to sage-devel@googlegroups.com To unsubscribe from this

[sage-devel] Re: Sage 3.1.2.alpha3 released

2008-08-31 Thread mabshoff
On Aug 31, 7:44 am, John Cremona [EMAIL PROTECTED] wrote: Hi John, Build report 1: on the 64-bit machine Linux version 2.6.18.8-0.3-default ([EMAIL PROTECTED]) (gcc version 4.1.2 20061115 (prerelease) (SUSE Linux)) #1 SMP Tue Apr 17 08:42:35 UTC 2007 I have three all-new failures:      

[sage-devel] Re: Sage 3.1.2.alpha3 released

2008-08-31 Thread mabshoff
On Aug 31, 3:33 pm, David Joyner [EMAIL PROTECTED] wrote: Built fine on amd64 hardy heron but the test for benchmark.py failed. Do you want me to post it? It was similar to the output John posted. Hi David, I don't think we will need it. The Maple issue is now #4025 and I will post a patch

[sage-devel] Re: Doc Day 3: Saturday August 30th, 2008

2008-08-31 Thread mabshoff
Hi, as it turned out about 6 people contributed doctest patches while a number of other people dropped by and did some other work. So in total I would call it a success, especially since we reached 59.9% coverage and with some of the patches posted, but not reviewed in time for 3.1.2 we will

[sage-devel] Re: Sage 3.1.2.alpha3 released

2008-08-31 Thread mabshoff
On Aug 31, 4:33 pm, Martin Albrecht [EMAIL PROTECTED] wrote: On Sunday 31 August 2008, John Cremona wrote: SNIP Hi there, that means that I screwed up 32-bit compatibility. I'll look into it tomorrow. This is now #4027. Note that on OSX in addition the following happens too:

[sage-devel] Followup to Sage 3.1.2.alpha3 released - new_with_bits_prec(pi, 100) issue

2008-08-31 Thread mabshoff
Hi, this is a followup to the above thread. Mike Hansen wrote a doctest for gp.py and we hit the following problem: sage -t devel/sage/sage/interfaces/gp.py ** File /Users/mabshoff/sage-3.1.2.alpha3/tmp/gp.py, line 522

[sage-devel] Re: Sage 3.1.2.alpha3 released

2008-08-31 Thread mabshoff
On Aug 31, 8:57 pm, Jaap Spies [EMAIL PROTECTED] wrote: mabshoff wrote: Hello folks, Doc Day 3 went well and we barely missed the goal of 60% coverage with 59.9%. Tomorrow we will merge a couple more patches from the que and will surpass the August 2008 goal. Aside from the doctesting

[sage-devel] Final stretch for 3.1.2 reviews

2008-09-02 Thread mabshoff
Hello folks, the end of the 3.1.2 release cycle is near - at least the point where we will only merge bug fixes or even critical bug fixes. So if you have things sitting in trac waiting to make it in please find somebody to review the patch. Please also make sure that the positively reviewed

[sage-devel] Re: Final stretch for 3.1.2 reviews

2008-09-02 Thread mabshoff
On Sep 2, 6:43 am, John Cremona [EMAIL PROTECTED] wrote: Hi John, I hope I didn't kill #1115's chances by relabelling it from a bug fix to an enhancement, since I didn't just fix the bug... Nope, code from that area is high level and usually does introduce no failures that are platform

[sage-devel] Re: Sage 3.1.2.alpha4 released

2008-09-02 Thread mabshoff
On Sep 2, 9:20 am, John Cremona [EMAIL PROTECTED] wrote: Build reports Hi John, 32-bit: just the already known failures:         sage -t  devel/sage/sage/stats/hmm/chmm.pyx         sage -t  devel/sage/sage/stats/hmm/hmm.pyx         sage -t  devel/sage/sage/interfaces/gp.py on Linux

[sage-devel] Re: Script in spkg/base not commited

2008-09-03 Thread mabshoff
On Sep 3, 10:46 am, Arnaud Bergeron [EMAIL PROTECTED] wrote: Hi Arnaud, hg diff in spkg/base gives the diff at the bottom in a just-extracted sage-3.1.2.alpha4.  Should this repository be ignored or is this just an oversight? Oops, those scripts get copied from the local/bin repo and are

[sage-devel] Sciface Software GmbH (makers of MuPAD) bought by Mathworks (i.e. the MATLAB people)

2008-09-03 Thread mabshoff
In German from heise.de: http://www.heise.de/newsticker/MuPAD-verschwindet-aber-nur-als-Produktname--/meldung/115390 the gist: * MuPAD will only be sold until September 28th 2008 * MuPAD (Pro) licenses will remain valid * MuPAD will be available as part of the symbolic Matlab toolbox *

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