Lars Buitinck writes:
> The way to combine HV and
> Tfidf is
>
> hashing = HashingVectorizer(non_negative=True, norm=None)
> tfidf = TfidfTransformer()
> hashing_tfidf = Pipeline([("hashing", hashing), ("tidf", tfidf)])
>
I notice your use of the non_negative option in HashingVectorizer(), whe
I'm happy with these proposals, but expect that some users will find
themselves using sparsefuncs or extmath.
On 9 September 2014 07:31, Kyle Kastner wrote:
> I agree as well. Maybe default to everything other than validation
> private? Then see what people want to become public? Don't know wha
I agree as well. Maybe default to everything other than validation
private? Then see what people want to become public? Don't know what
nilearn is using but that should obviously be public too...
On Mon, Sep 8, 2014 at 5:17 PM, Olivier Grisel wrote:
> +1 as well for the combined proposal of Gael
+1 as well for the combined proposal of Gael and Matthieu (explicit
__all__ in sklearn/util/__init__.py) + prefixing private utils with
`_`.
--
Olivier
--
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Manually upgrade your production database.
When
On Mon, 08 Sep 2014, Yaroslav Halchenko wrote:
> hm... actually not clear since it claims that it is because of missing
> bdepends
> scikit-learn build-depends on missing:
> - libsvm-dev (>= 2.84.0)
> while that one is available :-/ I will check
yeap -- not yet available on arm64.
--
Yarosl
On Mon, 08 Sep 2014, Olivier Grisel wrote:
> 2014-09-08 7:46 GMT-07:00 Yaroslav Halchenko :
> > It is a bit early to say about Debian servers conclusively -- I have just
> > uploaded to Debian proper, so they have been rebuilt across
> > architectures:
> > https://buildd.debian.org/status/packa
2014-09-08 7:46 GMT-07:00 Yaroslav Halchenko :
>
> It is a bit early to say about Debian servers conclusively -- I have just
> uploaded to Debian proper, so they have been rebuilt across
> architectures:
>
> https://buildd.debian.org/status/package.php?p=scikit-learn&suite=unstable
> and armel seem
Variants include:
- Taking into account common internal nodes reached by two samples. In
this sense, proximity takes into account the paths that are common and
not only the leaves.
- Normalizing the counts by the number of training samples within the
common leaves (instead of simply counting +1 fo
On Mon, Sep 8, 2014 at 11:55 PM, Gilles Louppe wrote:
> I am rather -1 on making this a transform. There has many ways to come
> up with proximity measures in forest -- In fact, I dont think
> Breiman's is particularly well designed.
>
I think this is actually an argument for non-inclusion in th
I am rather -1 on making this a transform. There has many ways to come
up with proximity measures in forest -- In fact, I dont think
Breiman's is particularly well designed.
On 8 September 2014 16:52, Gael Varoquaux wrote:
> On Mon, Sep 08, 2014 at 11:49:26PM +0900, Mathieu Blondel wrote:
>> This
I agree with everything you said, Matthieu (which of course does not
answer the questions that you raise).
Gaël
On Mon, Sep 08, 2014 at 11:01:44PM +0900, Mathieu Blondel wrote:
> Maintaining backward compatibility for a subset of the utils only means that
> from now on we will have to decide whet
> I don't think that it can be a transform, because currently transform
> cannot modify y (and that's really a problem).
Brainfart! I hadn't thought about the problem well enough. Please
disregard the previous message.
G
---
On Mon, Sep 08, 2014 at 11:49:26PM +0900, Mathieu Blondel wrote:
> This could be a transform method added to RandomForestClassifier /
> RandomForestRegressor.
I don't think that it can be a transform, because currently transform
cannot modify y (and that's really a problem).
G
--
Awesome Oliver, thanks a lot!
On Sep 6, 2014 2:27 AM, "Olivier Grisel" wrote:
> Hi all,
>
> I just released 0.15.2. The source and binary packages for this
> release are on PyPi as usual:
>
> https://pypi.python.org/pypi/scikit-learn/0.15.2
>
> The website has the change log:
>
> http://scikit-le
This could be a transform method added to RandomForestClassifier /
RandomForestRegressor.
On Mon, Sep 8, 2014 at 11:14 PM, Gilles Louppe wrote:
> Hi Luca,
>
> This may not be the fastest implementation, but random forest
> proximities can be computed quite straightforwardly in Python given
> our
On Mon, 08 Sep 2014, Olivier Grisel wrote:
> >> I just released 0.15.2. The source and binary packages for this
> >> release are on PyPi as usual:
> >> https://pypi.python.org/pypi/scikit-learn/0.15.2
> > Congrats!
> > And FWIW -- 0.15.2 is available now from NeuroDebian for all
> > Debian/Ubun
2014-09-08 6:57 GMT-07:00 Yaroslav Halchenko :
> On Sat, 06 Sep 2014, Olivier Grisel wrote:
>
>> I just released 0.15.2. The source and binary packages for this
>> release are on PyPi as usual:
>
>> https://pypi.python.org/pypi/scikit-learn/0.15.2
>
> Congrats!
>
> And FWIW -- 0.15.2 is available n
+1 for seeing this implemented. I feel it would be a useful addition for
work we do here that involves use of random forests.
On Mon, Sep 8, 2014 at 3:14 PM, Gilles Louppe wrote:
> Hi Luca,
>
> This may not be the fastest implementation, but random forest
> proximities can be computed quite stra
+1 -- looks like a very handy 3-liner :)
2014-09-08 16:14 GMT+02:00 Gilles Louppe :
> Hi Luca,
>
> This may not be the fastest implementation, but random forest
> proximities can be computed quite straightforwardly in Python given
> our 'apply' function.
> See for instance
>
> https://github.com/
Hi Luca,
This may not be the fastest implementation, but random forest
proximities can be computed quite straightforwardly in Python given
our 'apply' function.
See for instance
https://github.com/glouppe/phd-thesis/blob/master/scripts/ch4_proximity.py#L12
>From a personal point of view, I never
Maintaining backward compatibility for a subset of the utils only means
that from now on we will have to decide whether an util deserves to be
public or not. While we are at it, I would rather make it explicit and use
an underscore prefix for private utils and no prefix for public utils.
This can b
On Sat, 06 Sep 2014, Olivier Grisel wrote:
> I just released 0.15.2. The source and binary packages for this
> release are on PyPi as usual:
> https://pypi.python.org/pypi/scikit-learn/0.15.2
Congrats!
And FWIW -- 0.15.2 is available now from NeuroDebian for all
Debian/Ubuntu-powered folks.
--
> > for personal reason I am writing a function to compute the outlier
> > measure from random forest
> > http://www.stat.berkeley.edu/~breiman/RandomForests/cc_home.htm#
> > outliers
>
> > with a little more work I can include the function in the sklearn
> > random forest class.
>
> Do you have a
Hi Sheila,
I think if you use an odd-number of neighbors you can break your ties.
Without a weight function, the probability should be comprised of votes
from the k-nearest neighbors. So, the tie at 0.5 means two neighbors are
class 2 and two are class 3 for the first two samples and a tie would b
Hi people,
So far we have had no policy of backward compatibility in sklearn/utils.
However, some of the utilities there are very useful for packages that
want to extend scikit-learn's functionality, such as seqlearn,
sklearn-theano, nilearn...
The latest set of changes in the validation utilitie
On Mon, Sep 08, 2014 at 10:05:58AM +0100, Luca Puggini wrote:
> for personal reason I am writing a function to compute the outlier
> measure from random forest
> http://www.stat.berkeley.edu/~breiman/RandomForests/cc_home.htm#
> outliers
> with a little more work I can include the function in the
Hi,
for personal reason I am writing a function to compute the outlier measure
from random forest
http://www.stat.berkeley.edu/~breiman/RandomForests/cc_home.htm#outliers
with a little more work I can include the function in the sklearn random
forest class.
Is the community interested? Should I d
Sorry it took a while to respond to this. I believe you'll just have to include
the gil before each print statement. At the beginning of the
enet_coordinate_descent algorithm you'll see a statement "with nogil:" which
releases the python gil increasing the c performance. I suppose you could jus
Any suggestion about KNeighborsClassifier().predict_proba ?
On 3 September 2014 14:57, Sheila the angel wrote:
> I am using KNeighborsClassifier and trying to obtain probabilistic output.
> But for many of the test sets I am getting equal probability for all class.
>
> >>>X_train, X_test, y_tra
Hello,
look in wilkipedia. There is the general algorithm to estimate the beta
coefficient in a simple linear regression trough the Ordinary Least Squares.
All that you need is in the page:
Then...
Marco
On 08 Sep 2014, at 09:54, Philipp Singer wrote:
> Is there a description about t
Is there a description about this somewhere? I can’t find it in the docu.
Thanks!
Am 05.09.2014 um 18:40 schrieb Flavio Vinicius :
> I the case of LinearRegression independent models are being fit for
> each response. But this is not the case for every multi-response
> estimator. Afaik, the mult
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