Re: [Scikit-learn-general] Isomap with more general inputs

2012-04-06 Thread Jacob VanderPlas
There was some discussion along these lines last year, but I don't think anyone has worked on it yet. Scikit-learn doesn't currently have the ability to do manifold learning from a precomputed distance matrix, but it could be extended to that pretty easily. What it would take would be to modif

[Scikit-learn-general] Isomap with more general inputs

2012-04-06 Thread Anthony Bak
I'd like to use isomap (and other manifold learning techniques) with abstract metric spaces (and perhaps more generally similarity and dissimilarity matricies - but we can put that aside for the moment). It looks to me like isomap assumes points are described by points in R^N or some data structure