Re: [SGE-discuss] GPUs as a resource

2017-05-24 Thread Reuti
om: Marco Donauer [mdona...@univa.com] >> Sent: Friday, May 19, 2017 17:49 >> To: Jimenez, Juan Esteban; Reuti >> Cc: SGE-discuss@liv.ac.uk >> Subject: Re: [SGE-discuss] GPUs as a resource >> >> Hi Juan, >> >> what have you been told by Univa, &g

Re: [SGE-discuss] GPUs as a resource

2017-05-19 Thread Marco Donauer
uer [mdona...@univa.com] > Sent: Friday, May 19, 2017 17:49 > To: Jimenez, Juan Esteban; Reuti > Cc: SGE-discuss@liv.ac.uk > Subject: Re: [SGE-discuss] GPUs as a resource > > Hi Juan, > > what have you been told by Univa, > regarding GPUs? > > Regards > Marco

Re: [SGE-discuss] GPUs as a resource

2017-05-19 Thread juanesteban.jime...@mdc-berlin.de
From: Marco Donauer [mdona...@univa.com] Sent: Friday, May 19, 2017 17:49 To: Jimenez, Juan Esteban; Reuti Cc: SGE-discuss@liv.ac.uk Subject: Re: [SGE-discuss] GPUs as a resource Hi Juan, what have you been told by Univa, regarding GPUs? Regards Marco Am 19. Mai 2017 17

Re: [SGE-discuss] GPUs as a resource

2017-05-19 Thread Marco Donauer
em Administrator, HPC MDC Berlin / IT-Dept. Tel.: +49 30 9406 2800 From: Reuti [re...@staff.uni-marburg.de] Sent: Friday, May 19, 2017 17:01 To: Jimenez, Juan Esteban Cc: William Hay; SGE-discuss@liv.ac.uk Subject: Re: [SGE-discuss] GPUs as a resource Am

Re: [SGE-discuss] GPUs as a resource

2017-05-19 Thread juanesteban.jime...@mdc-berlin.de
Esteban Cc: William Hay; SGE-discuss@liv.ac.uk Subject: Re: [SGE-discuss] GPUs as a resource > Am 19.05.2017 um 16:35 schrieb juanesteban.jime...@mdc-berlin.de: > >> You are being told by who or what? If it is a what then the exact message >> is helpful? > > By my colleagu

Re: [SGE-discuss] GPUs as a resource

2017-05-19 Thread juanesteban.jime...@mdc-berlin.de
> It does indeed but not by a whole lot for a queue on a couple of nodes. > Since you want to reserve these nodes for GPU users then the extra queue is > needless. > I suggest: > 1.Make the GPU complex FORCED (so users who don't request a gpu can't end up > on a node with gpus). > 2.Define the

Re: [SGE-discuss] GPUs as a resource

2017-05-19 Thread Reuti
> Am 19.05.2017 um 16:35 schrieb juanesteban.jime...@mdc-berlin.de: > >> You are being told by who or what? If it is a what then the exact message >> is helpful? > > By my colleagues who are running a 2nd cluster using Univa GridEngine. This > was a warning from Univa not to do it that way

Re: [SGE-discuss] GPUs as a resource

2017-05-19 Thread Reuti
.de] > Sent: Friday, May 19, 2017 16:37 > To: Jimenez, Juan Esteban > Cc: Kamel Mazouzi; SGE-discuss@liv.ac.uk > Subject: Re: [SGE-discuss] GPUs as a resource > >> Am 19.05.2017 um 16:33 schrieb juanesteban.jime...@mdc-berlin.de: >> >> I put them in /opt/sge/default/c

Re: [SGE-discuss] GPUs as a resource

2017-05-19 Thread Reuti
Then a boolean complex which is set to FORCED can be used: $ qconf -mc … gpu gpuBOOL== FORCED NO 00 and attach it to the exechost's complex_values: $ qconf -me gpu-node … complex_values gpu=TRUE Users then have to request "-l gpu" (resp.

Re: [SGE-discuss] GPUs as a resource

2017-05-19 Thread juanesteban.jime...@mdc-berlin.de
...@staff.uni-marburg.de] Sent: Friday, May 19, 2017 16:37 To: Jimenez, Juan Esteban Cc: Kamel Mazouzi; SGE-discuss@liv.ac.uk Subject: Re: [SGE-discuss] GPUs as a resource > Am 19.05.2017 um 16:33 schrieb juanesteban.jime...@mdc-berlin.de: > > I put them in /opt/sge/default/common/sge-

Re: [SGE-discuss] GPUs as a resource

2017-05-19 Thread juanesteban.jime...@mdc-berlin.de
> You are being told by who or what? If it is a what then the exact message is > helpful? By my colleagues who are running a 2nd cluster using Univa GridEngine. This was a warning from Univa not to do it that way because it increases qmaster workload Juan

Re: [SGE-discuss] GPUs as a resource

2017-05-19 Thread juanesteban.jime...@mdc-berlin.de
...@staff.uni-marburg.de] Sent: Friday, May 19, 2017 14:20 To: Jimenez, Juan Esteban Cc: Kamel Mazouzi; SGE-discuss@liv.ac.uk Subject: Re: [SGE-discuss] GPUs as a resource Hi, > Am 18.05.2017 um 14:15 schrieb juanesteban.jime...@mdc-berlin.de: > > I tried it according to the instructions, but it w

Re: [SGE-discuss] GPUs as a resource

2017-05-19 Thread Reuti
Hi, > Am 18.05.2017 um 12:37 schrieb juanesteban.jime...@mdc-berlin.de: > > Ok, so I create a new queue, gpu.q, that only has that node, with the complex > value for the gpu. I removed the node from @allhosts so that the all.q and > interactive.q don’t use the node. I also modified the user

Re: [SGE-discuss] GPUs as a resource

2017-05-19 Thread Reuti
erlin.de> > Cc: William Hay <w....@ucl.ac.uk>, "SGE-discuss@liv.ac.uk" > <sge-disc...@liverpool.ac.uk> > Subject: Re: [SGE-discuss] GPUs as a resource > > Hi, > For GPU integration we are using a solution like this one: > > https://github.com/kyamag

Re: [SGE-discuss] GPUs as a resource

2017-05-18 Thread juanesteban.jime...@mdc-berlin.de
gt; Cc: William Hay <w@ucl.ac.uk>, "SGE-discuss@liv.ac.uk" <sge-disc...@liverpool.ac.uk> Subject: Re: [SGE-discuss] GPUs as a resource Hi, For GPU integration we are using a solution like this one: https://github.com/kyamagu/sge-gpuprolog Regards On Thu, May 18, 2017 at

Re: [SGE-discuss] GPUs as a resource

2017-05-16 Thread juanesteban.jime...@mdc-berlin.de
i don't know what that means. Get Outlook for Android On Tue, May 16, 2017 at 10:10 PM +0200, "Reuti" > wrote: -BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Am 16.05.2017 um 22:07 schrieb

Re: [SGE-discuss] GPUs as a resource

2017-05-16 Thread Reuti
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Am 16.05.2017 um 22:07 schrieb juanesteban.jime...@mdc-berlin.de: > In our cluster we have one node with two Nvidia GPUs. I have been trying to > figure out how to set them up as consumable resources tied to an ACL, but I > can't get SGE to handle