Re: [SIESTA-L] Error in Cholesky factorisation in cdiag

2019-02-19 Por tôpico Nick Papior
This may happen due to two atoms getting too close. Could you check your atomic coordinates at the given MD step? Den man. 18. feb. 2019 kl. 22.12 skrev Mina Sedighi : > Dear Siesta users, > > > I perform a parallel relaxation simulation with siesta version 4.1-b3 on > cluster. I face the followi

Re: [SIESTA-L] Error in TranSiesta

2019-02-19 Por tôpico ziba torkashvand
Thank you for your reply. It is the first calculation for electrode and from this step, TSHS file must be produced. On Tue, Feb 19, 2019 at 12:37 AM Nick Papior wrote: > Probably the electrode TSHS files are not present in the directory. > Please ensure you follow the correct steps of a transies

Re: [SIESTA-L] Error in Cholesky factorisation in cdiag

2019-02-19 Por tôpico sullah
Hi, It's difficult to pinpoint the problem without looking at the input (.fdf) file as well as no information regarding the compilers. Are you using (Diag.ParallelOverK true.)? You might want to try (Diag.DivideAndConquer .true.). Are you using an updated version of the scalapack? Best, E