[slurm-users] Multithreads config

2018-02-16 Thread david MARTIN
*Hi,* ** *I have a single physical server with :* ** * *63 cpus (each cpu has 16 cores) * * *480Gb total memory* ** ** ** *NodeNAME= Sockets=1 CoresPerSocket=16 ThreadsPerCore=1 Procs=63 REALMEMORY=48*** ** ** ** ** ** *This configuration will not work. What is should be ?*

[slurm-users] Multithreads config

2018-02-16 Thread david martin
*Hi,* ** *I have a single physical server with :* ** * *63 cpus (each cpu has 16 cores) * * *480Gb total memory* ** ** ** *NodeNAME= Sockets=1 CoresPerSocket=16 ThreadsPerCore=1 Procs=63 REALMEMORY=48*** ** ** ** ** ** *This configuration will not work. What is should be ?*

[slurm-users] LAST TASK ID

2018-02-06 Thread david martin
Hi, I´m running a batch array script and would like to execute a command after the last task #SBATCH --array 1-10%10:1 sh myscript.R inputdir/file.${SLURM_ARRAY_TASK_ID} # Would like to run a command after the last task For exemple when i was using SGE there was something like this | 

[slurm-users] Dependencies problem with cfncluster

2017-12-20 Thread david martin
Hi folks, Not sure i should post this here but thought you may have seen this problem before. I´m running slurm(16.05) together with cfncluster from aws and using autoscaling. It seems to work except for dependencies. I always get an error: _sbatch: error: Batch job submission falied:

[slurm-users] Autoscaling slurm

2017-12-18 Thread david martin
Hi, I´m using slurm together with clustercfn autoscaling. I just have a problem and thought that you may help. When i run a script #Script.sh # /bin/bash ./myprogram --threads=5  inputfile outputfile The program uses 5 threads , assuming only 1 thread per cpu is launched it would