Hi all,
About 2 years ago there was a thread about using Xpress to determine
peak area for label free quantification (using the -M option).
{http://groups.google.com/group/spctools-discuss/browse_thread/thread/
4503efcb3de121ae/4d7b98b5a9c6aefc?lnk=gst&q=label%2Bfree
%2BXpress#4d7b98b5a9c6aefc}
This work pretty well for me on the peptide level but I wonder if
there is a way to use this data and get info on the protein level
using the TPP (or else). The best thing would be to get this data
somehow into protein prophet but if there is another way that would be
great.
Thanks for any help.
Oded
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