Re: [systemd-devel] list-boots is incorrect, was: lost journal persistence

2014-05-15 Thread Chris Murphy

On May 12, 2014, at 9:58 AM, Chris Murphy li...@colorremedies.com wrote:

 
 On May 12, 2014, at 7:06 AM, Kirill Elagin kirela...@gmail.com wrote:
 
 Could it be that all the boot ids are actually the same for some reason?
 I had this issue in a container when systemd was reading boot_id from 
 `/proc/sys/kernel/random/boot_id` and since /proc was bind-mounted, boot_id 
 always was host's boot_id.
 
 You can also run `journalctl -F _BOOT_ID` to see a set of all the boot ids 
 recorded in the journal (this must agree with `journalctl --list-boots`.
 
 
 # journalctl --list-boots | wc -l
 36
 [root@rawhide ~]# journalctl -F _BOOT_ID | wc -l
 80
 # cat /proc/sys/kernel/random/boot_id
 420fa190-e7dd-4cd7-b248-fd62417d7c02
 # reboot
 ###
 # journalctl --list-boots | wc -l
 36
 [root@rawhide ~]# journalctl -F _BOOT_ID | wc -l
 81
 # cat /proc/sys/kernel/random/boot_id
 1e0d5346-85cb-477b-9ae2-2cfb53097b97
 
 
 So there are more boot ID's than there are list-boots, and list-boots doesn't 
 increment while boot ID's do. And neither of these boot id's match any of the 
 boot id's in --list-boots.

Deleting the files in /var/log/journal/machineid/ fixes the problem on the 
Fedora 20 and Fedora Rawhide VMs experiencing this problem. If the files are 
restored, the problem returns. Yet --verify shows PASS for each log file. So it 
seems there's some kind of corruption or confusion with these log files.

The btrfs filesystem is mounted with autodefrag option, for which there have 
been some problems with kernel 3.12 and older. But the Rawhide system has only 
been using 3.14 and 3.15 kernels so if there's still some problem I'm not sure 
how to isolate it since journalctl --verify seems to think the files are OK.

Despite autodefrag enabled, the systemjournal has ~1450 fragments according to 
filefrag. If I boot from a rescue image so nothing is actively writing to these 
journal files, and recopy them such that they are each 1 extent only, then 
reboot the system, the list-boots changes. It actually goes down, from 45 boots 
to 31 boots, and stays stuck with additional reboots. Whereas BOOT_ID continues 
to increment as before. So just by copying the log files I get different 
--list-boot behavior. That's pretty strange.

Yes, of course also btrfs check and scrub find no problems with either Fedora 
20 or Fedora Rawhide Btrfs file systems this problem is happening on.




Chris Murphy
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Re: [systemd-devel] list-boots is incorrect, was: lost journal persistence

2014-05-15 Thread Lennart Poettering
On Thu, 15.05.14 12:01, Chris Murphy (li...@colorremedies.com) wrote:

 
 
 On May 12, 2014, at 9:58 AM, Chris Murphy li...@colorremedies.com wrote:
 
  
  On May 12, 2014, at 7:06 AM, Kirill Elagin kirela...@gmail.com wrote:
  
  Could it be that all the boot ids are actually the same for some reason?
  I had this issue in a container when systemd was reading boot_id from 
  `/proc/sys/kernel/random/boot_id` and since /proc was bind-mounted, 
  boot_id always was host's boot_id.
  
  You can also run `journalctl -F _BOOT_ID` to see a set of all the boot ids 
  recorded in the journal (this must agree with `journalctl --list-boots`.
  
  
  # journalctl --list-boots | wc -l
  36
  [root@rawhide ~]# journalctl -F _BOOT_ID | wc -l
  80
  # cat /proc/sys/kernel/random/boot_id
  420fa190-e7dd-4cd7-b248-fd62417d7c02
  # reboot
  ###
  # journalctl --list-boots | wc -l
  36
  [root@rawhide ~]# journalctl -F _BOOT_ID | wc -l
  81
  # cat /proc/sys/kernel/random/boot_id
  1e0d5346-85cb-477b-9ae2-2cfb53097b97
  
  
  So there are more boot ID's than there are list-boots, and list-boots 
  doesn't increment while boot ID's do. And neither of these boot id's match 
  any of the boot id's in --list-boots.
 
 Deleting the files in /var/log/journal/machineid/ fixes the problem on the 
 Fedora 20 and Fedora Rawhide VMs experiencing this problem. If the files are 
 restored, the problem returns. Yet --verify shows PASS for each log file. So 
 it seems there's some kind of corruption or confusion with these log files.
 
 The btrfs filesystem is mounted with autodefrag option, for which there have 
 been some problems with kernel 3.12 and older. But the Rawhide system has 
 only been using 3.14 and 3.15 kernels so if there's still some problem I'm 
 not sure how to isolate it since journalctl --verify seems to think the files 
 are OK.
 
 Despite autodefrag enabled, the systemjournal has ~1450 fragments according 
 to filefrag. If I boot from a rescue image so nothing is actively writing to 
 these journal files, and recopy them such that they are each 1 extent only, 
 then reboot the system, the list-boots changes. It actually goes down, from 
 45 boots to 31 boots, and stays stuck with additional reboots. Whereas 
 BOOT_ID continues to increment as before. So just by copying the log files I 
 get different --list-boot behavior. That's pretty strange.
 
 Yes, of course also btrfs check and scrub find no problems with either Fedora 
 20 or Fedora Rawhide Btrfs file systems this problem is happening on.

This is certainly weird... Copying these files to ext4, does that change
anything?

I wonder if this might have to do something with time changes? Maybe the
clock was not set correctly?

Maybe it is a perms issue with some files not accessible to some users?

Lennart

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Re: [systemd-devel] list-boots is incorrect, was: lost journal persistence

2014-05-15 Thread Chris Murphy

On May 15, 2014, at 3:55 PM, Lennart Poettering lenn...@poettering.net wrote:

 On Thu, 15.05.14 12:01, Chris Murphy (li...@colorremedies.com) wrote:
 
 
 
 On May 12, 2014, at 9:58 AM, Chris Murphy li...@colorremedies.com wrote:
 
 
 On May 12, 2014, at 7:06 AM, Kirill Elagin kirela...@gmail.com wrote:
 
 Could it be that all the boot ids are actually the same for some reason?
 I had this issue in a container when systemd was reading boot_id from 
 `/proc/sys/kernel/random/boot_id` and since /proc was bind-mounted, 
 boot_id always was host's boot_id.
 
 You can also run `journalctl -F _BOOT_ID` to see a set of all the boot ids 
 recorded in the journal (this must agree with `journalctl --list-boots`.
 
 
 # journalctl --list-boots | wc -l
 36
 [root@rawhide ~]# journalctl -F _BOOT_ID | wc -l
 80
 # cat /proc/sys/kernel/random/boot_id
 420fa190-e7dd-4cd7-b248-fd62417d7c02
 # reboot
 ###
 # journalctl --list-boots | wc -l
 36
 [root@rawhide ~]# journalctl -F _BOOT_ID | wc -l
 81
 # cat /proc/sys/kernel/random/boot_id
 1e0d5346-85cb-477b-9ae2-2cfb53097b97
 
 
 So there are more boot ID's than there are list-boots, and list-boots 
 doesn't increment while boot ID's do. And neither of these boot id's match 
 any of the boot id's in --list-boots.
 
 Deleting the files in /var/log/journal/machineid/ fixes the problem on the 
 Fedora 20 and Fedora Rawhide VMs experiencing this problem. If the files are 
 restored, the problem returns. Yet --verify shows PASS for each log file. So 
 it seems there's some kind of corruption or confusion with these log files.
 
 The btrfs filesystem is mounted with autodefrag option, for which there have 
 been some problems with kernel 3.12 and older. But the Rawhide system has 
 only been using 3.14 and 3.15 kernels so if there's still some problem I'm 
 not sure how to isolate it since journalctl --verify seems to think the 
 files are OK.
 
 Despite autodefrag enabled, the systemjournal has ~1450 fragments according 
 to filefrag. If I boot from a rescue image so nothing is actively writing to 
 these journal files, and recopy them such that they are each 1 extent only, 
 then reboot the system, the list-boots changes. It actually goes down, from 
 45 boots to 31 boots, and stays stuck with additional reboots. Whereas 
 BOOT_ID continues to increment as before. So just by copying the log files I 
 get different --list-boot behavior. That's pretty strange.
 
 Yes, of course also btrfs check and scrub find no problems with either 
 Fedora 20 or Fedora Rawhide Btrfs file systems this problem is happening on.
 
 This is certainly weird... Copying these files to ext4, does that change
 anything?

Each time I copy, no matter the file system, I get a different number of 
list-boots results each time. Yet each time the source and destination 
sha256sums for the journal files are the same. It makes no sense. Same 
sha256sums yet different --list-boot behavior. It's a non-deterministic hell it 
seems. Once the journals are affected by whatever is happening, they're 
permanently weird.

I think the state is sufficiently bizarre, with a huge pile of Btrfs patches 
applied in the 3.14 time frame (both systems ran 3.14 and 3.15 rc kernels) that 
this is just not worth looking at further. I'll keep the journals elsewhere, 
but I'm going to clear out /var/log/journal and let it start new ones from 
scratch and see how it goes, if the problem reoccurs.


 
 I wonder if this might have to do something with time changes? Maybe the
 clock was not set correctly?

It's a VM on a laptop host. Time is always correct.

 
 Maybe it is a perms issue with some files not accessible to some users?

They are all throw away test systems and I'm lazy so I only use root.

Chris Murphy



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Re: [systemd-devel] list-boots is incorrect, was: lost journal persistence

2014-05-15 Thread Zbigniew Jędrzejewski-Szmek
On Thu, May 15, 2014 at 05:19:28PM -0600, Chris Murphy wrote:
 
 On May 15, 2014, at 3:55 PM, Lennart Poettering lenn...@poettering.net 
 wrote:
 
  On Thu, 15.05.14 12:01, Chris Murphy (li...@colorremedies.com) wrote:
  
  
  
  On May 12, 2014, at 9:58 AM, Chris Murphy li...@colorremedies.com wrote:
  
  
  On May 12, 2014, at 7:06 AM, Kirill Elagin kirela...@gmail.com wrote:
  
  Could it be that all the boot ids are actually the same for some reason?
  I had this issue in a container when systemd was reading boot_id from 
  `/proc/sys/kernel/random/boot_id` and since /proc was bind-mounted, 
  boot_id always was host's boot_id.
  
  You can also run `journalctl -F _BOOT_ID` to see a set of all the boot 
  ids recorded in the journal (this must agree with `journalctl 
  --list-boots`.
  
  
  # journalctl --list-boots | wc -l
  36
  [root@rawhide ~]# journalctl -F _BOOT_ID | wc -l
  80
  # cat /proc/sys/kernel/random/boot_id
  420fa190-e7dd-4cd7-b248-fd62417d7c02
  # reboot
  ###
  # journalctl --list-boots | wc -l
  36
  [root@rawhide ~]# journalctl -F _BOOT_ID | wc -l
  81
  # cat /proc/sys/kernel/random/boot_id
  1e0d5346-85cb-477b-9ae2-2cfb53097b97
  
  
  So there are more boot ID's than there are list-boots, and list-boots 
  doesn't increment while boot ID's do. And neither of these boot id's 
  match any of the boot id's in --list-boots.
  
  Deleting the files in /var/log/journal/machineid/ fixes the problem on 
  the Fedora 20 and Fedora Rawhide VMs experiencing this problem. If the 
  files are restored, the problem returns. Yet --verify shows PASS for each 
  log file. So it seems there's some kind of corruption or confusion with 
  these log files.
  
  The btrfs filesystem is mounted with autodefrag option, for which there 
  have been some problems with kernel 3.12 and older. But the Rawhide system 
  has only been using 3.14 and 3.15 kernels so if there's still some problem 
  I'm not sure how to isolate it since journalctl --verify seems to think 
  the files are OK.
  
  Despite autodefrag enabled, the systemjournal has ~1450 fragments 
  according to filefrag. If I boot from a rescue image so nothing is 
  actively writing to these journal files, and recopy them such that they 
  are each 1 extent only, then reboot the system, the list-boots changes. It 
  actually goes down, from 45 boots to 31 boots, and stays stuck with 
  additional reboots. Whereas BOOT_ID continues to increment as before. So 
  just by copying the log files I get different --list-boot behavior. That's 
  pretty strange.
  
  Yes, of course also btrfs check and scrub find no problems with either 
  Fedora 20 or Fedora Rawhide Btrfs file systems this problem is happening 
  on.
  
  This is certainly weird... Copying these files to ext4, does that change
  anything?
 

 Each time I copy, no matter the file system, I get a different
  number of list-boots results each time. Yet each time the source and
  destination sha256sums for the journal files are the same. It makes
  no sense. Same sha256sums yet different --list-boot behavior. It's a
  non-deterministic hell it seems. Once the journals are affected by
  whatever is happening, they're permanently weird.

Probably the order of files in the directory (ls -U) changes randomly
upon copying to a different fs.

 I think the state is sufficiently bizarre, with a huge pile of Btrfs
  patches applied in the 3.14 time frame (both systems ran 3.14 and
  3.15 rc kernels) that this is just not worth looking at
  further. I'll keep the journals elsewhere, but I'm going to clear
  out /var/log/journal and let it start new ones from scratch and see
  how it goes, if the problem reoccurs.

I wouldn't rule out an issue with the journal code...

Zbyszek
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Re: [systemd-devel] list-boots is incorrect, was: lost journal persistence

2014-05-12 Thread Kirill Elagin
Could it be that all the boot ids are actually the same for some reason?
I had this issue in a container when systemd was reading boot_id from
`/proc/sys/kernel/random/boot_id` and since /proc was bind-mounted, boot_id
always was host's boot_id.

You can also run `journalctl -F _BOOT_ID` to see a set of all the boot ids
recorded in the journal (this must agree with `journalctl --list-boots`.
You can also add ` -o verbose` to see all the fields of records. Since you
say that the messages are actually stored in the journal, it might be
interesting to check their _BOOT_ID fields.


--
Кирилл Елагин


On Mon, May 12, 2014 at 12:30 AM, Chris Murphy li...@colorremedies.comwrote:

 
  It looks like --list-boots is broken. I have have the same problem on
 Rawhide with systemd-212-4.fc21.x86_64, which is a completely different VM.
 Here are the last three items with --list-boots
 
  -2 95117f702e4d43619072f87b20b2f31b Sat 2014-05-03 20:38:22 MDT—Sat
 2014-05-03 20:47:17 MDT
  -1 c9bf102876774c7a8748920f6135ddf6 Sat 2014-05-03 20:47:35 MDT—Sat
 2014-05-03 20:51:55 MDT
   0 f92e4dda29a54b89a3455a10bbb298b2 Sat 2014-05-03 21:01:17 MDT—Sat
 2014-05-03 21:05:24 MDT

 OK installed Rawhide clean today to a third VM, with a Btrfs subvolume
 var mounted at /var, and the problem doesn't occur. Each boot gets a new
 entry with --list-boots.

 The prior Rawhide and Fedora 20 meanwhile, still always have the same
 --list-boot list after each boot, stuck on May 3rd for some reason. So it
 seems something broke --list-boot in a state persistent manner with the
 journal files themselves. The data is in the journal file however, I can
 extract the prior boots with --since and --lines, it's just that -b [x] is
 useless. -b -1 takes me back over a week rather than the boot 30 minutes
 ago.



 Chris Murphy
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Re: [systemd-devel] list-boots is incorrect, was: lost journal persistence

2014-05-12 Thread poma
On 12.05.2014 15:06, Kirill Elagin wrote:
 Could it be that all the boot ids are actually the same for some reason?
 I had this issue in a container when systemd was reading boot_id from
 `/proc/sys/kernel/random/boot_id` and since /proc was bind-mounted, boot_id
 always was host's boot_id.
 
 You can also run `journalctl -F _BOOT_ID` to see a set of all the boot ids
 recorded in the journal (this must agree with `journalctl --list-boots`.
 You can also add ` -o verbose` to see all the fields of records. Since you
 say that the messages are actually stored in the journal, it might be
 interesting to check their _BOOT_ID fields.

$ journalctl -F _BOOT_ID | wc -l
1159
$ journalctl --list-boots | wc -l
1159


poma


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Re: [systemd-devel] list-boots is incorrect, was: lost journal persistence

2014-05-12 Thread Chris Murphy

On May 12, 2014, at 7:06 AM, Kirill Elagin kirela...@gmail.com wrote:

 Could it be that all the boot ids are actually the same for some reason?
 I had this issue in a container when systemd was reading boot_id from 
 `/proc/sys/kernel/random/boot_id` and since /proc was bind-mounted, boot_id 
 always was host's boot_id.
 
 You can also run `journalctl -F _BOOT_ID` to see a set of all the boot ids 
 recorded in the journal (this must agree with `journalctl --list-boots`.


# journalctl --list-boots | wc -l
36
[root@rawhide ~]# journalctl -F _BOOT_ID | wc -l
80
# cat /proc/sys/kernel/random/boot_id
420fa190-e7dd-4cd7-b248-fd62417d7c02
# reboot
###
# journalctl --list-boots | wc -l
36
[root@rawhide ~]# journalctl -F _BOOT_ID | wc -l
81
# cat /proc/sys/kernel/random/boot_id
1e0d5346-85cb-477b-9ae2-2cfb53097b97


So there are more boot ID's than there are list-boots, and list-boots doesn't 
increment while boot ID's do. And neither of these boot id's match any of the 
boot id's in --list-boots.


 You can also add ` -o verbose` to see all the fields of records. Since you 
 say that the messages are actually stored in the journal, it might be 
 interesting to check their _BOOT_ID fields.

--since=2014-05-08
_BOOT_ID=e39d1329d216487f951334b229449d81

--since=2014-05-09
_BOOT_ID=550ece50b3ed4e21b9a0c446b95c2ebd

--since=2014-05-04
_BOOT_ID=e428016363534ea595b1d9ba0440deeb


They all appear to have unique boot IDs in the journal. Yet they aren't listed 
in --list-boots. For whatever reason, --list-boots is a subset of what I 
actually have.


Chris Murphy

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Re: [systemd-devel] list-boots is incorrect, was: lost journal persistence

2014-05-11 Thread Chris Murphy
 
 It looks like --list-boots is broken. I have have the same problem on Rawhide 
 with systemd-212-4.fc21.x86_64, which is a completely different VM. Here are 
 the last three items with --list-boots
 
 -2 95117f702e4d43619072f87b20b2f31b Sat 2014-05-03 20:38:22 MDT—Sat 
 2014-05-03 20:47:17 MDT
 -1 c9bf102876774c7a8748920f6135ddf6 Sat 2014-05-03 20:47:35 MDT—Sat 
 2014-05-03 20:51:55 MDT
  0 f92e4dda29a54b89a3455a10bbb298b2 Sat 2014-05-03 21:01:17 MDT—Sat 
 2014-05-03 21:05:24 MDT

OK installed Rawhide clean today to a third VM, with a Btrfs subvolume var 
mounted at /var, and the problem doesn't occur. Each boot gets a new entry with 
--list-boots.

The prior Rawhide and Fedora 20 meanwhile, still always have the same 
--list-boot list after each boot, stuck on May 3rd for some reason. So it seems 
something broke --list-boot in a state persistent manner with the journal files 
themselves. The data is in the journal file however, I can extract the prior 
boots with --since and --lines, it's just that -b [x] is useless. -b -1 takes 
me back over a week rather than the boot 30 minutes ago.



Chris Murphy
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Re: [systemd-devel] list-boots is incorrect, was: lost journal persistence

2014-05-10 Thread Chris Murphy
 Fedora 20, systemd-208-16.fc20.x86_64
 
 I no longer have persistent journals written to disk. I've done at least two 
 dozen reboots today, yet journalctl --list-boots always reports the last 
 three entries as:
 
 -2 43ba57a4decd4e2fb69bfd04493455c0 Mon 2014-04-14 14:43:38 MDT—Tue 
 2014-04-15 09:32:57 MDT
 -1 dd915a875c9b43168a4b43bd322a94ac Wed 2014-04-23 10:58:48 MDT—Wed 
 2014-04-23 11:32:20 MDT
  0 eb5a4bb5c6364b84bf65020242c77347 Sat 2014-05-03 21:46:50 MDT—Sat 
 2014-05-03 22:22:54 MDT
 
 /var/log/journal/b7670…
 -rw-r-+ 1 root systemd-journal  8388608 May 10 17:46 system.journal
 
 So it seems to have written something to system.journal.
 
 
 # systemctl status systemd-journald.service 
 systemd-journald.service - Journal Service
   Loaded: loaded (/usr/lib/systemd/system/systemd-journald.service; static)
   Active: active (running) since Sat 2014-05-10 17:45:32 MDT; 1min 8s ago
 Docs: man:systemd-journald.service(8)
   man:journald.conf(5)
 Main PID: 288 (systemd-journal)
   Status: Processing requests...
   CGroup: /system.slice/systemd-journald.service
   └─288 /usr/lib/systemd/systemd-journald
 
 May 10 17:45:32 f20v.localdomain systemd-journal[288]: Runtime journal is 
 using 8.0M (max allowed 125.2M, trying to leave 187.9M fr...5.2M).
 May 10 17:45:32 f20v.localdomain systemd-journal[288]: Runtime journal is 
 using 8.0M (max allowed 125.2M, trying to leave 187.9M fr...5.2M).
 May 10 17:45:32 f20v.localdomain systemd-journal[288]: Journal started
 May 10 17:45:32 f20v.localdomain systemd-journal[288]: Permanent journal is 
 using 104.0M (max allowed 4.0G, trying to leave 4.0G fr...4.0G).
 May 10 17:45:32 f20v.localdomain systemd-journal[288]: Time spent on flushing 
 to /var is 26.812ms for 761 entries.
 
 I am mounting a Btrfs subvolume named var at /var, but it's always been this 
 way and I have log entries going back to March. So I'm not sure when this 
 started or what prompted it. The proximity to the journal start and flush to 
 /var is the same time as mounting.
 
 May 10 17:45:32 f20v.localdomain systemd[1]: Mounting /var...
 May 10 17:45:32 f20v.localdomain systemd[1]: var.mount: Directory /var to 
 mount over is not empty, mounting anyway.
 May 10 17:45:32 f20v.localdomain systemd[1]: Mounted /var.
 
 So I thought maybe the flush is happening to /var before var subvolume is 
 mounted there, but that's not the case; the reason why it's not empty is due 
 to dhclient always creating one folder prior to var subvolume mounting at 
 /var.
 
 /var/lib/dhclient
 
 There are no AVC messages, and the selinux context for /var and 
 /var/log/journal is correct. In /var/log the Xorg.0.log has today's date so 
 clearly it can be written to. lastlog and boot.log also have the current boot 
 date/time stamp.
 
 journalctl --verify comes up with no problems, only pass.
 
 
 Very confusing.

It looks like --list-boots is broken. I have have the same problem on Rawhide 
with systemd-212-4.fc21.x86_64, which is a completely different VM. Here are 
the last three items with --list-boots

 -2 95117f702e4d43619072f87b20b2f31b Sat 2014-05-03 20:38:22 MDT—Sat 2014-05-03 
20:47:17 MDT
 -1 c9bf102876774c7a8748920f6135ddf6 Sat 2014-05-03 20:47:35 MDT—Sat 2014-05-03 
20:51:55 MDT
  0 f92e4dda29a54b89a3455a10bbb298b2 Sat 2014-05-03 21:01:17 MDT—Sat 2014-05-03 
21:05:24 MDT

So its last entries end the same date the Fedora 20 system ends, May 3. But I 
have a week of usage on both systems, and using -b doesn't work because they're 
not in the list. But if I do

journalctl --since=today
or
--since=yesterday
or
--since=2014-05-04

They are all there. The journal is being written to disk. It's just that 
--list-boots isn't listing any boots since May 3, on two different VMs. So I 
don't know what broke it but it's broken in common with Fedora 20 and Rawhide.



Chris Murphy
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