[Bug 1190887] Re: kernel bug and Oops (__journal_remove_journal_head)

2013-06-14 Thread theairkit
** Package changed: ubuntu => linux (Ubuntu)

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Title:
  kernel bug and Oops (__journal_remove_journal_head)

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[Bug 1190887] [NEW] kernel bug and Oops (__journal_remove_journal_head)

2013-06-14 Thread theairkit
Public bug reported:

Hi.

I have a SuperMicro server with Ubuntu 10.04.4 LTS:
motherboard: SuperMicro X8DTT-F
RAID controller: LSI MegaRAID SAS 9280-4i4e + SAS Expander Chenbro CK23601
Linux dbnode 2.6.32-41-server #91-Ubuntu SMP x86_64 GNU/Linux
 megaraid_sas module: 00.00.05.30

Host is running MySQl-Percona: 5.5.27-rel29.0-315.lucid

So, first appeared:

Jun 11 19:03:49 dbnode kernel: BUG: unable to handle kernel NULL pointer 
dereference at 0008
 Jun 11 19:03:49 dbnode kernel: IP: [] 
__journal_remove_journal_head+0x1d/0x150
 Jun 11 19:03:49 dbnode kernel: PGD c0833d067 PUD c08efb067 PMD 0
 Jun 11 19:03:49 dbnode kernel: Oops:  [#1] SMP
 Jun 11 19:03:49 dbnode kernel: last sysfs file: 
/sys/module/megaraid_sas/version
 Jun 11 19:03:49 dbnode kernel: CPU 4
 Jun 11 19:03:49 dbnode kernel: Modules linked in: btrfs zlib_deflate crc32c 
libcrc32c ufs qnx4 hfsplus hfs minix ntfs vfat msdos fat jfs xfs exportfs 
reiserfs xt_comment xt_tcpudp iptable_filter ip_tables x_tables 8021q garp stp 
ipmi_devintf ipmi_si ipmi_msghandler fbcon tileblit font bitblit lp psmouse 
softcursor ioatdma vga16fb parport serio_raw vgastate joydev usbhid hid igb 
megaraid_sas dca
 Jun 11 19:03:49 dbnode kernel: Pid: 944, comm: kjournald Not tainted 
2.6.32-41-server #91-Ubuntu X8DTT
 Jun 11 19:03:49 dbnode kernel: RIP: 0010:[] 
[] __journal_remove_journal_head+0x1d/0x150
 Jun 11 19:03:50 dbnode kernel: RSP: 0018:880c086e9c70 EFLAGS: 00010282
 Jun 11 19:03:50 dbnode kernel: RAX:  RBX: 88134c983cb0 
RCX: 0034
 Jun 11 19:03:50 dbnode kernel: RDX: 0002 RSI: 88134c983cb0 
RDI: 88134c983cb0
 Jun 11 19:03:50 dbnode kernel: RBP: 880c086e9c80 R08: 6010 
R09: ec956c9676072c02
 Jun 11 19:03:50 dbnode kernel: R10:  R11:  
R12: 
 Jun 11 19:03:50 dbnode kernel: R13: 0001 R14: 8813ddcc4600 
R15: 88141717354c
 Jun 11 19:03:50 dbnode kernel: FS: () 
GS:880c5c60() knlGS:
 Jun 11 19:03:50 dbnode kernel: CS: 0010 DS: 0018 ES: 0018 CR0: 8005003b
 Jun 11 19:03:50 dbnode kernel: CR2: 0008 CR3: 000618954000 
CR4: 06e0
 Jun 11 19:03:50 dbnode kernel: DR0:  DR1:  
DR2: 
 Jun 11 19:03:50 dbnode kernel: DR3:  DR6: 0ff0 
DR7: 0400
 Jun 11 19:03:50 dbnode kernel: Process kjournald (pid: 944, threadinfo 
880c086e8000, task 880c077cc500)
 Jun 11 19:03:50 dbnode kernel: Stack:
 Jun 11 19:03:50 dbnode kernel: 88134c983cb0 880103069c40 
880c086e9ca0 8121cae4
 Jun 11 19:03:50 dbnode kernel: <4> <0> 880c086e9ca0 88134c983cb0 
880c086e9d30 812179e5
 Jun 11 19:03:50 dbnode kernel: <4> <0>  00030001 
880c086e9cd0 8814
 Jun 11 19:03:50 dbnode kernel: Call Trace:
 Jun 11 19:03:50 dbnode kernel: [] 
journal_remove_journal_head+0x24/0x40
 Jun 11 19:03:50 dbnode kernel: [] 
journal_submit_data_buffers+0x135/0x320
 Jun 11 19:03:50 dbnode kernel: [] 
journal_commit_transaction+0x2d2/0xe40
 Jun 11 19:03:50 dbnode kernel: [] ? 
default_spin_lock_flags+0x9/0x10
 Jun 11 19:03:50 dbnode kernel: [] ? lock_timer_base+0x3c/0x70
 Jun 11 19:03:50 dbnode kernel: [] ? 
try_to_del_timer_sync+0x79/0xd0
 Jun 11 19:03:50 dbnode kernel: [] kjournald+0xed/0x250
 Jun 11 19:03:50 dbnode kernel: [] ? 
autoremove_wake_function+0x0/0x40
 Jun 11 19:03:50 dbnode kernel: [] ? kjournald+0x0/0x250
 Jun 11 19:03:50 dbnode kernel: [] kthread+0x96/0xa0
 Jun 11 19:03:50 dbnode kernel: [] child_rip+0xa/0x20
 Jun 11 19:03:50 dbnode kernel: [] ? kthread+0x0/0xa0
 Jun 11 19:03:50 dbnode kernel: [] ? child_rip+0x0/0x20
 Jun 11 19:03:50 dbnode kernel: Code: eb a9 66 66 66 2e 0f 1f 84 00 00 00 00 00 
55 48 89 e5 48 83 ec 10 48 89 1c 24 4c 89 64 24 08 0f 1f 44 00 00 4c 8b 67 40 
48 89 fb <41> 8b 7c 24 08 85 ff 0f 88 a1 00 00 00 f0 ff 43 60 41 8b 74 24
 Jun 11 19:03:50 dbnode kernel: RIP [] 
__journal_remove_journal_head+0x1d/0x150
 Jun 11 19:03:50 dbnode kernel: RSP 
 Jun 11 19:03:50 dbnode kernel: CR2: 0008
 Jun 11 19:03:50 dbnode kernel: ---[ end trace a4e2215d4221effa ]---


Then, a lot of such messages:

Jun 11 19:04:55 dbnode kernel: BUG: soft lockup - CPU#4 stuck for 61s! 
[mysqld:19492]
 Jun 11 19:04:55 dbnode kernel: Modules linked in: btrfs zlib_deflate crc32c 
libcrc32c ufs qnx4 hfsplus hfs minix ntfs vfat msdos fat jfs xfs exportfs 
reiserfs xt_comment xt_tcpudp iptable_filter ip_tables x_tables 8021q garp stp 
ipmi_devintf ipmi_si ipmi_msghandler fbcon tileblit font bitblit lp psmouse 
softcursor ioatdma vga16fb parport serio_raw vgastate joydev usbhid hid igb 
megaraid_sas dca
 Jun 11 19:04:55 dbnode kernel: CPU 4:
 Jun 11 19:04:55 dbnode kernel: Modules linked in: btrfs zlib_deflate crc32c 
libcrc32c ufs qnx4 hfsplus hfs minix ntfs vfat msdos fat jfs xfs exportfs 
reiserfs xt_comme