[Bug 1763992] Re: pymol should be updated to 2.1.0 to use PyQt interface

2021-10-07 Thread Graham Inggs
It seems this was fixed in disco.

pymol (2.2.0+dfsg-3) unstable; urgency=medium

  * Team Upload.
  * Upload Qt5 GUI to unstable for wider testing.
  * Merge changes from previous NMU 2.2.0+dfsg-1.1.
  * Update Standards-Version to 4.3.0 (no changes required).
  * Remove unneeded Suggests: python3-tk from pymol-data.
  * Fix up autopkgtest tests for Qt5 GUI.

 -- Stuart Prescott   Mon, 31 Dec 2018 17:22:59 +1100


** Changed in: pymol (Ubuntu)
   Status: New => Fix Released

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Title:
  pymol should be updated to 2.1.0 to use PyQt interface

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[Bug 1763992] Re: pymol should be updated to 2.1.0 to use PyQt interface

2018-04-21 Thread Jeremy Bicha
Ubuntu's pymol has no changes compared to Debian. Therefore, it would be
useful if you could report this bug to the Debian maintainers of pymol.

https://wiki.ubuntu.com/Debian/Bugs

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Title:
  pymol should be updated to 2.1.0 to use PyQt interface

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[Bug 1763992] Re: pymol should be updated to 2.1.0 to use PyQt interface

2018-04-21 Thread Jack Howarth
Just to be clear, the changes required to the existing packaging are...

--- pymol-1.8.4.0+dfsg/debian/control   2016-10-20 11:33:21.0 -0400
+++ pymol-2.1.0+dfsg/debian/control 2018-04-14 13:57:37.0 -0400
@@ -24,6 +24,8 @@
 Package: pymol
 Architecture: any
 Depends: python-numpy,
+ python-pyqt5,
+ python-pyqt5.qtopengl,
  python-pmw,
  python-tk,
  ${misc:Depends},

--- pymol-1.8.4.0+dfsg/debian/patches/series2016-10-20 11:33:21.0 
-0400
+++ pymol-2.1.0+dfsg/debian/patches/series  2018-04-14 14:04:52.0 
-0400
@@ -4,8 +4,8 @@
 #24_autodock_plugin.patch
 27_fix_pymol_path_in_setup.patch
 28_no_data_install_in_python_path.patch
-29_fix_path_to_splash.patch
 31_fix_format-security.patch
 32_fix_spelling_lintian_warnings.patch
 33_fix_relative_paths_in_example_scripts.patch
 34_fix_examples_add_fetch_instead_of_load.patch
+40_fix_apbstools_search_path.patch

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Title:
  pymol should be updated to 2.1.0 to use PyQt interface

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[Bug 1763992] Re: pymol should be updated to 2.1.0 to use PyQt interface

2018-04-14 Thread Ubuntu Foundations Team Bug Bot
The attachment "02_test-suite.patch" seems to be a patch.  If it isn't,
please remove the "patch" flag from the attachment, remove the "patch"
tag, and if you are a member of the ~ubuntu-reviewers, unsubscribe the
team.

[This is an automated message performed by a Launchpad user owned by
~brian-murray, for any issues please contact him.]

** Tags added: patch

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Title:
  pymol should be updated to 2.1.0 to use PyQt interface

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[Bug 1763992] Re: pymol should be updated to 2.1.0 to use PyQt interface

2018-04-14 Thread Jack Howarth
Add additional 40_fix_apbstools_search_path.patch should be added to
solve the long standing issue of the apbstools plugin not being able to
find the required psize.py and pdb2pqr.py files from the pdb2pqr package
in ubuntu. Trivial to fix.

** Patch added: "40_fix_apbstools_search_path.patch"
   
https://bugs.launchpad.net/ubuntu/+source/pymol/+bug/1763992/+attachment/5115693/+files/40_fix_apbstools_search_path.patch

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Title:
  pymol should be updated to 2.1.0 to use PyQt interface

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[Bug 1763992] Re: pymol should be updated to 2.1.0 to use PyQt interface

2018-04-14 Thread Jack Howarth
The 33_fix_relative_paths_in_example_scripts.patch has to be regenerated
to cope with context changes in the pymol 2.1.0 sources.

** Patch added: "33_fix_relative_paths_in_example_scripts.patch"
   
https://bugs.launchpad.net/ubuntu/+source/pymol/+bug/1763992/+attachment/5115692/+files/33_fix_relative_paths_in_example_scripts.patch

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Title:
  pymol should be updated to 2.1.0 to use PyQt interface

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[Bug 1763992] Re: pymol should be updated to 2.1.0 to use PyQt interface

2018-04-14 Thread Jack Howarth
The 22_fix_pymol_import.patch has to be regenerated to cope with context
changes in the pymol 2.1.0 sources.


** Patch added: "22_fix_pymol_import.patch"
   
https://bugs.launchpad.net/ubuntu/+source/pymol/+bug/1763992/+attachment/5115691/+files/22_fix_pymol_import.patch

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Title:
  pymol should be updated to 2.1.0 to use PyQt interface

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[Bug 1763992] Re: pymol should be updated to 2.1.0 to use PyQt interface

2018-04-14 Thread Jack Howarth
The 02_test-suite.patch has to be regenerated to cope with context
changes in the pymol 2.1.0 sources.

** Patch added: "02_test-suite.patch"
   
https://bugs.launchpad.net/ubuntu/+source/pymol/+bug/1763992/+attachment/5115690/+files/02_test-suite.patch

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  pymol should be updated to 2.1.0 to use PyQt interface

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[Bug 1763992] Re: pymol should be updated to 2.1.0 to use PyQt interface

2018-04-14 Thread Jack Howarth
The PyQt GUI for pymol appears as shown in the attached screen shot
under 18.04.

** Attachment added: "Screenshot from 2018-04-14 15-09-08.png"
   
https://bugs.launchpad.net/ubuntu/+source/pymol/+bug/1763992/+attachment/5115694/+files/Screenshot%20from%202018-04-14%2015-09-08.png

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  pymol should be updated to 2.1.0 to use PyQt interface

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