[Bug 1938234] Re: Sync macaulay2 1.18+ds-1~exp2 (universe) from Debian experimental (main)

2021-07-29 Thread Dmitry Shachnev
This bug was fixed in the package macaulay2 - 1.18+ds-1~exp3
Sponsored for Doug Torrance (profzoom)

---
macaulay2 (1.18+ds-1~exp3) experimental; urgency=medium

  * debian/copyright
- Add entries for packages that had previously been omitted.
  + NCAlgebraV2
  + SubalgebraBases
  + SuffixTrees
  * debian/patches/skip-failing-core-tests.patch
- Skip plethysms test; failing on mipsel.
- Stop schur-2 test a bit earlier; failing on armel and armhf.
  * debian/scripts/copyright-helper.m2
- Improve regex for determining whether packages are actually listed in
  d/copyright.
- Simplify missingPackages function; detect path to d/copyright instead
  of requiring the user to specify it.
- Improve missingPackages function by searching for packages in the
  source directory (including undistributed packages) instead of just
  the ones listed in the version hash table.
  * debian/scripts/generate-examples.m2
- Cache new failing examples, updating d/examples and
  d/patches/use-cached-examples accordingly:
  + PrimaryDecomposition::primaryDecomposition
  + M0nbar::writeCurveInSingletonSpineBasis
  + M0nbar::writeCurveInSingletonSpineBasis(ZZ,List)
- Simplify generateExamples function; detect path to debian directory
  instead of requiring the user to specify it.
  * debian/tests/control
- Remove polymake from Depends; not necessary for most tests and not
  available in armel.

 -- Doug Torrance   Thu, 29 Jul 2021 07:50:46
-0400

macaulay2 (1.18+ds-1~exp2) experimental; urgency=medium

  * debian/gbp.conf
- Set default debian-branch to debian/master.
  * debian/patches/hardening.patch
- New patch; Don't override -fstack-protector-strong from dpkg-buildflags.
  * debian/patches/fix-visualize-firefox.patch
- Switch from Forwarded to Applied-Upstream.
  * debian/patches/reproducible-tvalues.patch
- New patch; sort files in d directory when making tvalues.m2.  Otherwise,
  tvalues.m2 is not reproducible.
  * debian/patches/skip-failing-core-tests.patch
- Skip core-tests.m2.
  * debian/patches/skip-failing-package-tests.patch
- Skip new failing tests:
  + check(8, "DiffAlg")
  + check(7, "MultiprojectiveVarieties")
  + check(3, "NumericalImplicitization")
  + check(8, "NumericalImplicitization")
  + check(0, "Topcom")
- Add missing Bug field.
  * debian/salsa-ci.yml
- Allow reprotest to fail in Salsa pipeline.
  * debian/scripts/generate-examples.m2
- Cache new failing examples:
  + GraphicalModelsMLE::solverMLE(...,RealPrecision=>...)
  + MultiprojectiveVarieties::EmbeddedProjectiveVariety ===>
EmbeddedProjectiveVariety
  + SimplicialDecomposability::isSheddingVertex
  + SpecialFanoFourfolds::toGrass(EmbeddedProjectiveVariety)
  + SRdeformations::complement(Complex)
- Add generated examples to debian/examples.
- Set AuxiliaryFiles and CacheExampleOutput options for affected packages
  in debian/patches/use-cached-examples.patch.
- Don't reload package when generating examples unless necessary.  The
  Macaulay2Doc examples were really slowing down the script -- now we only
  need to wait for the first one.
- Improve error handling; only raise an error if we have extra .out files.

 -- Doug Torrance   Tue, 27 Jul 2021 10:43:17
-0400

macaulay2 (1.18+ds-1~exp1) experimental; urgency=medium

  * debian/control
- Add libmpfi-dev and libtbb-dev to Build-Depends; needed for new
  features added upstream.
- Remove imagemagick from Suggests; no longer required by the
  Graphs package as it now uses xdg-open to open generated images.
  * debian/copyright
- Remove paragraph from Cygwin files that have been removed from
  source.
- Add/update paragraphs for new/modified packages.
  * debian/examples
- Add cached examples generated by d/scripts/generate-examples.m2.
  * debian/macaulay2-common.info
- New file; use dh_installinfo to install info files instead of
  dh_install.  This way, we can more easily support builds with
  "nodoc" in DEB_BUILD_OPTIONS.
  * debian/macaulay2-common.lintian-overrides
- Add package-contains-documentation-outside-usr-share-doc
  override for new file.
  * debian/patches
- Refresh for new upstream release.
- Remove patches applied or otherwise made unnecessary upstream.
  + dont-capture-check-core-32-bit.patch
  + dont-capture-diffalg-tests.patch
  + smaller-points-examples.patch
  + use-debian-applications.patch
  * debian/patches/fix-visualize-firefox.patch
- New patch; fix Visualize package in Firefox (symlinks to assets
  weren't working).
  * debian/patches/remove-build-paths-from-docs
- Remove patch; we now cache examples that were causing
  reproducibility issues.
  * debian/patches/skip-failing-{core,package}-tests
- Stop skipping tests that have been fixed upstream and start
  skipping 

[Bug 1938234] Re: Sync macaulay2 1.18+ds-1~exp2 (universe) from Debian experimental (main)

2021-07-27 Thread Mathew Hodson
** Changed in: macaulay2 (Ubuntu)
   Importance: Undecided => Wishlist

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Title:
  Sync macaulay2 1.18+ds-1~exp2 (universe) from Debian experimental
  (main)

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[Bug 1938234] Re: Sync macaulay2 1.18+ds-1~exp2 (universe) from Debian experimental (main)

2021-07-27 Thread Doug Torrance
It would be nice to have the latest version of Macaulay2 in impish, but
with the short window between the projected release of bullseye (Aug.
14) and the Debian import freeze (Aug. 19), there may not be time to
upload 1.18 to sid in time to sync to impish.

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Title:
  Sync macaulay2 1.18+ds-1~exp2 (universe) from Debian experimental
  (main)

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