Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ...

2011-09-19 Thread Doug Meil
to write MR-Jobs. Regards, Thomas -Original Message- From: Doug Meil [mailto:doug.m...@explorysmedical.com] Sent: Freitag, 16. September 2011 21:42 To: user@hbase.apache.org Subject: Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ... Chris, agreed... There are sometimes

RE: Writing MR-Job: Something like OracleReducer, JDBCReducer ...

2011-09-19 Thread Steinmaurer Thomas
distribution available as VMWare. Thanks! Thomas -Original Message- From: Doug Meil [mailto:doug.m...@explorysmedical.com] Sent: Montag, 19. September 2011 15:35 To: user@hbase.apache.org Subject: Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ... Those were all from

RE: Writing MR-Job: Something like OracleReducer, JDBCReducer ...

2011-09-18 Thread Steinmaurer Thomas
! Thomas -Original Message- From: Sonal Goyal [mailto:sonalgoy...@gmail.com] Sent: Freitag, 16. September 2011 18:07 To: user@hbase.apache.org Subject: Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ... Hi Thomas, I just assumed that you are already using reducers. From what I

RE: Writing MR-Job: Something like OracleReducer, JDBCReducer ...

2011-09-18 Thread Steinmaurer Thomas
is AFAIK the old way to write MR-Jobs. Regards, Thomas -Original Message- From: Doug Meil [mailto:doug.m...@explorysmedical.com] Sent: Freitag, 16. September 2011 21:42 To: user@hbase.apache.org Subject: Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ... Chris, agreed

Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ...

2011-09-17 Thread Michel Segel
haven't benchmarked either against a reducer. Does that make sense? -Mike From: doug.m...@explorysmedical.com To: user@hbase.apache.org Date: Fri, 16 Sep 2011 15:41:44 -0400 Subject: Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ... Chris, agreed

Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ...

2011-09-16 Thread Sonal Goyal
There is a DBOutputFormat class in the org.apache,hadoop.mapreduce.lib.db package, you could use that. Or you could write to the hdfs and then use something like HIHO[1] to export to the db. I have been working extensively in this area, you can write to me directly if you need any help. 1.

Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ...

2011-09-16 Thread Michel Segel
I think you need to get a little bit more information. Reducers are expensive. When Thomas says that he is aggregating data, what exactly does he mean? When dealing w HBase, you really don't want to use a reducer. You may want to run two map jobs and it could be that just dumping the output via

Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ...

2011-09-16 Thread Sonal Goyal
Hi Thomas, I just assumed that you are already using reducers. From what I understood, please correct me if I am mistaken, You have data in HBase and you are running a MR job to aggregate the data. You have the map as well as reduce phase and as part of the final output, you want to send the

Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ...

2011-09-16 Thread Sonal Goyal
Michel, Sorry can you please help me understand what you mean when you say that when dealing with HBase, you really dont want to use a reducer? Here, Hbase is being used as the input to the MR job. Thanks Sonal On Fri, Sep 16, 2011 at 2:35 PM, Michel Segel michael_se...@hotmail.comwrote: I

RE: Writing MR-Job: Something like OracleReducer, JDBCReducer ...

2011-09-16 Thread Michael Segel
? Date: Fri, 16 Sep 2011 21:41:01 +0530 Subject: Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ... From: sonalgoy...@gmail.com To: user@hbase.apache.org Michel, Sorry can you please help me understand what you mean when you say that when dealing with HBase, you really dont

Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ...

2011-09-16 Thread Sonal Goyal
Sep 2011 21:41:01 +0530 Subject: Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ... From: sonalgoy...@gmail.com To: user@hbase.apache.org Michel, Sorry can you please help me understand what you mean when you say that when dealing with HBase, you really dont want

Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ...

2011-09-16 Thread Chris Tarnas
the occurrence of each column name via dynamic counters. There is no need for a reducer. Does that help? Date: Fri, 16 Sep 2011 21:41:01 +0530 Subject: Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ... From: sonalgoy...@gmail.com To: user@hbase.apache.org Michel

Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ...

2011-09-16 Thread Doug Meil
done at my client's site, we try very hard to avoid reducers. [Note, I'm sure I'm going to get hammered on this when I head to NY in Nov. :-) ] Date: Fri, 16 Sep 2011 23:00:49 +0530 Subject: Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ... From: sonalgoy...@gmail.com

RE: Writing MR-Job: Something like OracleReducer, JDBCReducer ...

2011-09-16 Thread Michael Segel
Chris, I don't know what sort of aggregation you are doing, but again, why not write to a temp table instead of using a reducer? Subject: Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ... From: c...@email.com Date: Fri, 16 Sep 2011 11:58:05 -0700 To: user

RE: Writing MR-Job: Something like OracleReducer, JDBCReducer ...

2011-09-16 Thread Michael Segel
...@explorysmedical.com To: user@hbase.apache.org Date: Fri, 16 Sep 2011 15:41:44 -0400 Subject: Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ... Chris, agreed... There are sometimes that reducers aren't required, and then situations where they are useful. We have both kinds of jobs

Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ...

2011-09-16 Thread Chris Tarnas
instead of using a reducer? Subject: Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ... From: c...@email.com Date: Fri, 16 Sep 2011 11:58:05 -0700 To: user@hbase.apache.org If only I could make NY in Nov :) We extract out large numbers of DNA sequence reads from HBase

Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ...

2011-09-16 Thread Chris Tarnas
are doing, but again, why not write to a temp table instead of using a reducer? Subject: Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ... From: c...@email.com Date: Fri, 16 Sep 2011 11:58:05 -0700 To: user@hbase.apache.org If only I could make NY in Nov :) We

Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ...

2011-09-16 Thread Sam Seigal
Date: Fri, 16 Sep 2011 15:41:44 -0400 Subject: Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ... Chris, agreed... There are sometimes that reducers aren't required, and then situations where they are useful.  We have both kinds of jobs. For others following the thread, I

Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ...

2011-09-16 Thread Doug Meil
a reducer. Does that make sense? -Mike From: doug.m...@explorysmedical.com To: user@hbase.apache.org Date: Fri, 16 Sep 2011 15:41:44 -0400 Subject: Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ... Chris, agreed... There are sometimes that reducers aren't required

Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ...

2011-09-16 Thread Doug Meil
in Nov. :-) ] Date: Fri, 16 Sep 2011 23:00:49 +0530 Subject: Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ... From: sonalgoy...@gmail.com To: user@hbase.apache.org Hi Michael, Yes, thanks, I understand the fact that reducers can be expensive with all

Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ...

2011-09-16 Thread Sam Seigal
: doug.m...@explorysmedical.com To: user@hbase.apache.org Date: Fri, 16 Sep 2011 15:41:44 -0400 Subject: Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ... Chris, agreed... There are sometimes that reducers aren't required, and then situations where they are useful.  We

Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ...

2011-09-16 Thread Doug Meil
head to NY in Nov. :-) ] Date: Fri, 16 Sep 2011 23:00:49 +0530 Subject: Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ... From: sonalgoy...@gmail.com To: user@hbase.apache.org Hi Michael, Yes, thanks, I understand the fact that reducers can

Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ...

2011-09-16 Thread Sam Seigal
Date: Fri, 16 Sep 2011 15:41:44 -0400 Subject: Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ... Chris, agreed... There are sometimes that reducers aren't required, and then situations where they are useful.  We have both kinds of jobs. For others following the thread, I

Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ...

2011-09-16 Thread Sam Seigal
. :-)   ] Date: Fri, 16 Sep 2011 23:00:49 +0530 Subject: Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ... From: sonalgoy...@gmail.com To: user@hbase.apache.org Hi Michael, Yes, thanks, I understand the fact that reducers can be expensive with all the shuffling

Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ...

2011-09-16 Thread Doug Meil
Date: Fri, 16 Sep 2011 15:41:44 -0400 Subject: Re: Writing MR-Job: Something like OracleReducer, JDBCReducer ... Chris, agreed... There are sometimes that reducers aren't required, and then situations where they are useful. We have both kinds of jobs. For others following the thread