I have a strange problem that occurs randomly at times, when i try to
launch many jobs into a empty queue system from same project
the first 4-5 jobs always crash with random errors but most in regards to
not being able to read a file.
if i launch jobs manually everything goes fine, if i
Hi Reuti,
They're pretty mammoth cluster nodes. But anyway, the load is set to 99 to
stop it from rejecting jobs based on load (in this test queue).
We're not currently using the checkpoint feature either.
Regards,
Joseph David Borġ
josephb.org
On 23 January 2014 10:11, Reuti
Thats right,, its the jobs that is crashing.
hav a python scrip that generates the jobs and sends them into the queue
with qsub.
I have been testing and digging a bit for a while now, and it seems when i
launch multiple jobs under the same project, they read from the same _mesh
folder, and
Hi all,
I have been trying to use modulefiles from my compute nodes with no avail.
When a job starts, the modulecmd command is in the path, but the module
function is nowhere to be found. I have tried to add calls to
/etc/profile.d/modules.sh in both /etc/bashrc and ~/.bashrc, and even
Hi,
Am 27.01.2014 um 17:26 schrieb Txema Heredia:
I have been trying to use modulefiles from my compute nodes with no avail.
When a job starts, the modulecmd command is in the path, but the module
function is nowhere to be found. I have tried to add calls to
/etc/profile.d/modules.sh in
In the message dated: Mon, 27 Jan 2014 17:50:58 +0100,
The pithy ruminations from Reuti on
Re: [gridengine users] Using modules form the compute nodes were:
= Hi,
=
= Am 27.01.2014 um 17:26 schrieb Txema Heredia:
=
= I have been trying to use modulefiles from my compute nodes with no avail.
Eventually this will be fixed.
qsub -cwd -v module should work
qsub -cwd -V . does not transfer functions..
Maybe Univa will fix it.if not already
-Ed
-Original Message-
From: berg...@merctech.com [mailto:berg...@merctech.com]
Sent: Monday, January 27,
Hi,
Anyone have experience with aws ec2 and gridengine for a standalone instance
running ge with dhcp enabled?
Is there a way to configure the ami so that if the ip address and hostname
change it will not effect the instance of ge.
Ex: 16 core 30 GB ram with EBS storage 200 GB and where the ip
There is nothing that special about AWS EC2. What you get is a Xen VM
on a standard DHCP network.
You can set the localhost hostname using standard methods like
/etc/hosts when your VM boots.
--Chi
On Mon, Jan 27, 2014 at 3:24 PM, Ed Lauzier elauzi...@perlstar.com wrote:
Hi,
Anyone have
I try to avoid using the loopback address for hostname, but may be ok for a
standalone
instance( like fedora desktop systems used to doand maybe still do)
I'll give it a shot and see how it works.
I also use x11 graphical tools in the instance ( rstudio... R plots.etc)
Grid Engine certainly doesn't like it when you use the loopback 127.0.0.1 for
the hostname...if that is what you were intending to do.
Regards,
Bill.
On Jan 27, 2014, at 4:33 PM, Ed Lauzier elauzi...@perlstar.com wrote:
I try to avoid using the loopback address for hostname, but may be ok
Update:
Finally coaxed it to work after a bit of cleanup.
put desired hostname on loopback address.
example 127.0.0.1 localhost.localdomain localhost myhostname.mydomain.com
myhostname
act_qmaster set to the desired hostname
cleaned up queue, admin, and sub host entries
set hostname
El 27/01/14 17:50, Reuti escribió:
Hi,
Am 27.01.2014 um 17:26 schrieb Txema Heredia:
I have been trying to use modulefiles from my compute nodes with no avail.
When a job starts, the modulecmd command is in the path, but the module function is nowhere to be found. I
have tried to add calls
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