Excellent question thank you.
Each queue has the following for queue sorting:
$ qconf -sq bio | grep seq
seq_no100
$ qconf -sq free64 | grep seq
seq_no7000
So it should pick queue bio first.What I think is happening is that
if a task first lands on free64
Hi William.
It is a large job array witch each task ending in bio or free64 queue.
I think the issue is that a task that *starts* on free64 queue picks up
the h_rt limit and when it is restarted and lands on bio queue which has
no time-limit, it get's killed because the original h_rt sticks.
I was trying to add some new exec nodes, and now my qstat and qsub on my
master is giving this error.
error: fopen(/opt/sge/default/common/bootstrap) failed: No such file
or directory
When I go to that directory, the bootstrap file does not exist.
What did I do and how do I recover?
Did your SGE_ROOT and/or SGE_CELL environment variable settings change? All
the GE binaries expect to find the bootstrap file at
${SGE_ROOT}/${SGE_CELL}/common. I suspect that the settings changed, and
your bootstrap file actually lives elsewhere.
On Tue, Jun 02, 2015 at 10:51:58AM -0500, Dan
