Re: [OMPI users] submitted job stops

2008-04-09 Thread Mark Kosmowski
I would try specifically allowing only the network interface if it is eth0 (or eth1, etc) on each node. Reconfigure the nodes if needed so that each interface is the same eth number for this. I had this same issue occur and I think it was because some of my nodes had one network for the ompi comm

Re: [OMPI users] submitted job stops

2008-04-09 Thread Danesh Daroui
Mark Kosmowski skrev: Danesh: Have you tried "mpirun -np 4 --hostfile hosts hostname" to verify that ompi is working? When I run "mpirun -np 4 --hostfile hosts hostname" same thing happens and it just hangs. Can it be a clue? Can you remote access from each node to each other node? Y

Re: [OMPI users] configure:25579: error: No atomic primitives available for ppc74xx-linux-gnu

2008-04-09 Thread Bailey, Eric
Thanks so much.. I only had to use --disable-mpi-f77 and --disable-mpi-f90 in addition to the --host=powerpc-unknown-linux-gnu to have configure work successfully. Ie. /home/MPI/openmpi-1.2.6/configure --prefix=/home/MPI/openmpi-1.2.6-install-7 448 --host=powerpc-unknown-linux-gnu --disable-mpi

Re: [OMPI users] Problems using Intel MKL with OpenMPI and Pathscale

2008-04-09 Thread Brock Palen
How large is your stack size? I have had to increases that before, I don't use pathscale myself though. I do use Threaded GOTO with OpenMPI all the time. Brock Palen www.umich.edu/~brockp Center for Advanced Computing bro...@umich.edu (734)936-1985 On Apr 9, 2008, at 3:01 PM, Åke Sandgre

Re: [OMPI users] configure:25579: error: No atomic primitives available for ppc74xx-linux-gnu

2008-04-09 Thread Brian W. Barrett
On Wed, 9 Apr 2008, Bailey, Eric wrote: /home/MPI/openmpi-1.2.6/configure --prefix=/home/MPI/openmpi-1.2.6/openmpi-1.2.6-install-7448 --host=ppc74xx-linux --build=i686-pc-linux-gnu --host should be formated in the output of config.guess, which would be something along the lines of processor f

[OMPI users] Problems using Intel MKL with OpenMPI and Pathscale

2008-04-09 Thread Åke Sandgren
Hi! I have an annoying problem that i hope someone here has some info on. I'm trying to build a code with OpenMPI+Intel MKL+Pathscale. When using the sequential (non-threaded) MKL everything is ok, but when using the threaded MKL i get a segfault. This doesn't happen when using MVAPICH so i susp

Re: [OMPI users] configure:25579: error: No atomic primitives available for ppc74xx-linux-gnu

2008-04-09 Thread Michael
On Apr 9, 2008, at 1:57 PM, Bailey, Eric wrote: I am trying to use a cross compiler to build Open MPI for an embedded ppc7448 running Linux 2.6 but during configure I get the following error. configure:25579: error: No atomic primitives available for ppc74xx-linux-gnu Does anyone have an idea as

[OMPI users] configure:25579: error: No atomic primitives available for ppc74xx-linux-gnu

2008-04-09 Thread Bailey, Eric
I am trying to use a cross compiler to build Open MPI for an embedded ppc7448 running Linux 2.6 but during configure I get the following error. configure:25579: error: No atomic primitives available for ppc74xx-linux-gnu Does anyone have an idea as to how to get past this error? I searched on th

Re: [OMPI users] submitted job stops

2008-04-09 Thread Mark Kosmowski
Danesh: Have you tried "mpirun -np 4 --hostfile hosts hostname" to verify that ompi is working? Can you remote access from each node to each other node? If any node has more than 1 network device, are you using the ompi options to specify which device to use? Good luck, Mark > Message: 5 > Da

[OMPI users] Ang: Re: submitted job stops

2008-04-09 Thread danes...@bredband.net
Actually my program is very simple MPI program "Hello World" which just prints rank of each processor and then terminates. When I run my program on a single processor machine with e.g 4 processors (oversubscribing) it shows: Hello world from processor with rank 0 Hello world from processor wit

Re: [OMPI users] submitted job stops

2008-04-09 Thread Reuti
Hi, Am 08.04.2008 um 21:58 schrieb Danesh Daroui: I had posted a message about my problem and I did all solutions but the problem is not solved it. The problem is that I have installed Open-MPI on three machines (1 master+2 slaves). When I submit a job to master I can see that "orted" daemo

Re: [OMPI users] Oversubscription performance problem

2008-04-09 Thread Lars Andersson
On Fri, Apr 4, 2008 at 4:30 PM, Lars Andersson wrote: > Hi, > > I'm just in the progress of moving our application from LAM/MPI to > OpenMPI, mainly because OpenMPI makes it easier for a user to run > multiple jobs(MPI universa) simultaneously. This is useful if a user > wants to run smaller e